| Protein: | ATX5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1043 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATX5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
800.0 | [0..27] | [1035..284] |
|
|
776.0 | [0..124] | [1001..374] |
|
|
776.0 | [0..116] | [1039..385] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MIIKRKLKTL KRCNSTNEED DIVRKKRKVN LNGGGSGGDY YYPLNLLGEI GAGIVPGKNG 60
61 FSVSLCKQVS CSPKVEVVEE EEEEEEIKST RLVSRPPLVK TSRGRVQVLP SRFNDSVIEN 120
121
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [121-238] |
1 11 21 31 41 51
| | | | | |
1 WRKDNKSSGE EREEEIEEEA CRKEKVKVSS NHSLKIKQQE TKFTPRNYKY SSSSALCGEI 60
61 DDEDKCEEIV RYGNSFEMKK QRYVDDEPRP KKEGVYGPED FYSGDLVWGK SGRNEPFW
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [239-434] |
1 11 21 31 41 51
| | | | | |
1 PAIVIDPMTQ APELVLRSCI PDAACVMFFG HSGTENERDY AWVRRGMIFP FVDYVERLQE 60
61 QSELRGCNPR DFQMALEEAL LADQGFTEKL MQDIHMAAGN QTFDDSVYRW VEEAAGSSQY 120
121 LDHVAPSQDM KKYRNPRACV GCGMVLSFKM AQKMKALIPG DQLLCQPCSK LTKPKHVCGI 180
181 CKRIWNHLDS QSWVRC
|
| Detection Method: | |
| Confidence: | 35.221849 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [435-597] |
1 11 21 31 41 51
| | | | | |
1 DGCKVWIHSA CDQISHKHFK DLGETDYYCP TCRTKFDFEL SDSEKPDSKS KLGKNNAPMV 60
61 LPDKVIVVCS GVEGIYFPSL HLVVCKCGSC GPERKALSEW ERHTGSKAKN WRTSVKVKSS 120
121 KLPLEEWMMK LAEFHANATA AKPPKRPSIK QRKQRLLSFL REK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [598-786] |
1 11 21 31 41 51
| | | | | |
1 YEPVNVKWTT ERCAVCRWVE DWDYNKIIIC NRCQIAVHQE CYGTRNVRDF TSWVCKACET 60
61 PEIKRECCLC PVKGGALKPT DVETLWVHVT CAWFQPEVCF ASEEKMEPAL GILSIPSSNF 120
121 VKICVICKQI HGSCTQCCKC STYYHAMCAS RAGYRMELHC LEKNGRQITK MVSYCSYHRA 180
181 PNPDTVLII
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [787-1043] |
1 11 21 31 41 51
| | | | | |
1 QTPSGVFSAK SLVQNKKKSG TRLILANREE IEESAAEDTI PIDPFSSARC RLYKRTVNSK 60
61 KRTKEEGIPH YTGGLRHHPS AAIQTLNAFR HVAEEPKSFS SFRERLHHLQ RTEMERVCFG 120
121 RSGIHGWGLF ARRNIQEGEM VLEYRGEQVR GIIADLREAR YRREGKDCYL FKISEEVVVD 180
181 ATEKGNIARL INHSCMPNCY ARIMSVGDDE SRIVLIAKTT VASCEELTYD YLFDPDEPDE 240
241 FKVPCLCKSP NCRKFMN
|
| Detection Method: | |
| Confidence: | 8.522879 |
| Match: | 2o8jA |
| Description: | No description for 2o8jA was found. |
