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View Structure Prediction Details

Protein: CCD11_ARATH
Organism: Arabidopsis thaliana
Length: 339 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCD11_ARATH.

Description E-value Query
Range
Subject
Range
gi|114599953 - gi|114599953|ref|XP_517728.2| PREDICTED: cyclin B1 [Pan troglodytes]
273.0 [0..7] [320..228]

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Predicted Domain #1
Region A:
Residues: [1-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSYRFSDYL HMSVSFSNDM DLFCGEDSGV FSGESTVDFS SSEVDSWPGD SIACFIEDER  60
   61 HFVPGHDYLS RFQTRSLDAS AREDSVAWIL KVQAYYNFQP LTAYLAVNYM DRFLYARRLP 120
  121 ETSGWPMQLL AVACLSLAAK MEEILVPSLF DFQVAGVKYL FEAKTIKRME LLVLSVLDWR 180
  181 LRSVTPFDFI SFFAYKIDPS GTFLGFFISH ATEIILSNIK EASFLEYWPS SIAAAAILCV 240
  241 ANELPSLSSV VNPHESPETW CDGLSKEKIV RCYRLMKAMA IENNRLNTPK VIAKLRVSVR 300
  301 ASSTLTRPSD ESSFSSSSPC KRRKLSGYSW VGDETSTSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.39794
Match: 2jgzB
Description: No description for 2jgzB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle