| Protein: | gi|25454673, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 657 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25454673, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
457.0 | [0..1] | [644..101] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MVIFSIRIFF IVAVICIAFV LPVNYYGQPM VHKEIHLESS EVFTIENLKE GSKWLWVHCL 60
61 ALYIITSAAC LLLYFEYSTI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [81-347] |
1 11 21 31 41 51
| | | | | |
1 AKMRLGHITG CASKPSQFTV LIRAIPWSPE QSYSDTLSKF FTNYYSSSYV SHQMVYHNGI 60
61 IQRLLRDAER MCQTLKHVSP EINCKPSLRP CTFCGGPTAT SSFHILSNEA DSVKGMELGE 120
121 LTMTTTTTEQ ERSAAFVFFK TRYDALVVSE VLQSSNPMLW VTDLAPEPHD VYWKNLNIPY 180
181 RQLWIRKIAT LVGAVAFMFV FLIPVTFIQG LTQLVQLSHA FPFLRGILSK NFINQVITGY 240
241 LPSVILILFF YAVPPLMMYF SALEGCI
|
| Detection Method: | |
| Confidence: | 0.953 |
| Match: | 1ciiA |
| Description: | COLICIN IA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [348-439] |
1 11 21 31 41 51
| | | | | |
1 SRSIRKKSAC IKVLYFTIWN VFFVNILSGS VIRQLNVFSS VRDIPAQLAR AVPTQAGFFM 60
61 TYCFTSGWAS LACEIMQPMA LIWNLVAKVV TK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [440-657] |
1 11 21 31 41 51
| | | | | |
1 NEDESYETLR FPYHTEIPRL LLFGLLGFTN SVIAPLILPF LLIYFFLAYL IYKNQILNVY 60
61 ITKYESGGQY WPIFHNTTIF SLILTQIIAL GFFGLKLSTV ASGFTIPLIL LTLLFSEYCR 120
121 QRFAPIFNKN PAQVLIDMDR ADEISGKMEE LHKKLHNVYS QIPLHSQKSS SKAECSNPFK 180
181 KQELPDPEKL KPEEGDAIAK ELWGFQGNES GQEHDTKS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
