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View Structure Prediction Details

Protein: C90D1_ARATH
Organism: Arabidopsis thaliana
Length: 491 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C90D1_ARATH.

Description E-value Query
Range
Subject
Range
CYP2C8 - cytochrome P450, family 2, subfamily C, polypeptide 8
359.0 [0..26] [491..4]

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Predicted Domain #1
Region A:
Residues: [1-491]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTSSSLLFF SFFFFIIIVI FNKINGLRSS PASKKKLNDH HVTSQSHGPK FPHGSLGWPV  60
   61 IGETIEFVSS AYSDRPESFM DKRRLMYGRV FKSHIFGTAT IVSTDAEVNR AVLQSDSTAF 120
  121 VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW 180
  181 SEDQPVLLQD VSKTVAFKVL AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH 240
  241 RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID 300
  301 MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ 360
  361 KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY LRSVHLDKLY YESPYKFNPW 420
  421 RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM 480
  481 KNKLPIWIKR I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.09691
Match: 1pq2A
Description: Crystal Structure of Human Drug Metabolizing Cytochrome P450 2C8
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle