YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|229603249, gi...
Organism:	Bacillus anthracis str. A0248
Length:	796 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|229603249, gi....

Description	E-value	Query Range	Subject Range
gi\|49329663, gi\|... - gi\|49478107\|ref\|YP_037354.1\| penicillin acylase II [Bacillus thuringiensis serovar konkukian str. 97...	0.0	[1..796]	[1..796]
gi\|52142262, gi\|... - gi\|52142262\|ref\|YP_084567.1\| penicillin acylase II [Bacillus cereus E33L], gi\|51975731\|gb\|AAU17281.1...	0.0	[1..796]	[1..796]
gi\|42738270, gi\|... - gi\|42782345\|ref\|NP_979592.1\| beta-lactam antibiotic acylase family protein [Bacillus cereus ATCC 109...	0.0	[1..796]	[1..796]
gi\|163863123, gi... - gi\|89208491\|ref\|ZP_01186995.1\| Penicillin amidase [Bacillus weihenstephanensis KBAB4], gi\|89153583\|g...	0.0	[1..796]	[1..796]
gi\|47564406, gi\|... - gi\|47564406\|ref\|ZP_00235451.1\| penicillin G acylase, putative [Bacillus cereus G9241], gi\|47558558\|g...	0.0	[1..796]	[1..794]
gi\|30021363, gi\|... - gi\|30021363\|ref\|NP_832994.1\| penicillin acylase II [Bacillus cereus ATCC 14579], gi\|29896917\|gb\|AAP1...	0.0	[34..796]	[1..763]
gi\|23100760, gi\|... - gi\|23100760\|ref\|NP_694227.1\| penicillin acylase [Oceanobacillus iheyensis HTE831], gi\|22778994\|dbj\|B...	0.0	[16..795]	[24..798]
gi\|17231416, gi\|... - gi\|17231416\|ref\|NP_487964.1\| hypothetical protein all3924 [Nostoc sp. PCC 7120], gi\|17133058\|dbj\|BAB... gi\|25532465 - pir\|\|AE2296 hypothetical protein all3924 [imported] - Nostoc sp. (strain PCC 7120)	0.0	[5..796]	[7..847]
gi\|186463884, gi... - gi\|23125242\|ref\|ZP_00107183.1\| COG2366: Protein related to penicillin acylase [Nostoc punctiforme PC...	0.0	[4..796]	[6..847]
gi\|65320573 - gi\|65320573\|ref\|ZP_00393532.1\| COG2366: Protein related to penicillin acylase [Bacillus anthracis st...	0.0	[1..630]	[1..630]

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Predicted Domain #1

Region A:
Residues: [1-796]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVVIKKKRT RGKKIFIWSS SIVLLLVICT AIFLNIYTLK SVPKIDGTIK LEDLQRAVTV  60
   61 KRDSKGVPHI KAENAHDLYF SQGYVQAQDR LFQMDLSRRQ ASGMLSEVVG EAAVDRDKLF 120
  121 RTLGLRRAAE ASVSQYDGEA KDALQSFADG VNAFIREAKE EKKLPVEFTI LGYEPAEWSI 180
  181 VDTLTIGKYM AFDLGGHWHG QAFRYWALKN LPKEQTNELF PTYPKDAPRL LAELENTNVN 240
  241 VAQSFAKTII PPEFNGSNNW VISGEKSASG KPILADDPHL SLATPSIWYQ SKLEMKDLNV 300
  301 SGVIFAGVPG VILGHNDKIA WGVTNTGPDV QDLYIEKRNP NNENEFLYND KWEKATVVDE 360
  361 SIKVKGGKTI PYNVTVTRHG PVISEFADKG KEKTKTVFAL KWTALEPSAE LKAVLNMNKA 420
  421 KDWNEFETAL QDFHTPTQNF VFASNDGTIA YKANGNIPVR KKGDGSLPVP GWTDEYEWEG 480
  481 YIPYDQLPKV INPKQGFIST ANNKIVDDNY PYHISNTWAQ PYRQMRIQEF LQEKEKYTVK 540
  541 DLEELQMDQK NLYGKEFTPI FLKELNKASL HEVEKEGVKQ LTKWNFYDSK DDAAPLIFHL 600
  601 LMKEISNTLF SKEIPKDVME LFEGKSQVVD ELIRKEVAGE KSTWFTKYGG FTKVVHTSYE 660
  661 NVMKKLQKEY GPDVTEWKWG DYHQLTFTHP ISKSSSMLAL LAFNREKPVP IGGSQVTVQA 720
  721 ASYGDNGIVN HGASWRFVID TKDMSNGYHI VGPGQSGHFR SDWYHDQIDD WVNGTYHTTT 780
  781 LNTEGIEGKV LNLEPK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	159.0
Match:	1oqzA
Description:	Crystal Structures of Glutaryl 7-Aminocephalosporanic Acid Acylase: Insight into Autoproteolytic Activation
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.19663085909195	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: