YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|254722078
Organism:	Bacillus anthracis str. A1055
Length:	173 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|254722078.

Description	E-value	Query Range	Subject Range
gi\|51978132, gi\|... - gi\|52144663\|ref\|YP_082166.1\| dihydrofolate reductase family protein [Bacillus cereus E33L], gi\|51978...	4.0E-38	[1..173]	[1..173]
gi\|229042511, gi... - gi\|229042511\|ref\|ZP_04190256.1\| Enzyme [Bacillus cereus AH676], gi\|228726864\|gb\|EEL78076.1\| Enzyme [... gi\|30018833, gi\|... - gi\|30018833\|ref\|NP_830464.1\| pyrimidine reductase [Bacillus cereus ATCC 14579], gi\|29894375\|gb\|AAP07... gi\|228657403, gi... - gi\|229126081\|ref\|ZP_04255103.1\| Enzyme [Bacillus cereus BDRD-Cer4], gi\|228657403\|gb\|EEL13219.1\| Enzy...	5.0E-38	[1..173]	[1..173]
gi\|49331783, gi\|... - gi\|49480227\|ref\|YP_034907.1\| dihydrofolate reductase family protein [Bacillus thuringiensis serovar ...	6.0E-38	[1..173]	[1..173]
gi\|89155893, gi\|... - gi\|89206169\|ref\|ZP_01184731.1\| bifunctional deaminase-reductase, C-terminal [Bacillus weihenstephane...	1.0E-37	[1..173]	[1..173]
gi\|42779795, gi\|... - gi\|42779795\|ref\|NP_977042.1\| dihydrofolate reductase family protein [Bacillus cereus ATCC 10987], gi...	2.0E-37	[1..173]	[1..173]
gi\|47568101, gi\|... - gi\|47568101\|ref\|ZP_00238806.1\| RibD C-terminal domain [Bacillus cereus G9241], gi\|47555255\|gb\|EAL136...	5.0E-37	[1..173]	[1..173]
gi\|65318075 - gi\|65318075\|ref\|ZP_00391034.1\| COG0262: Dihydrofolate reductase [Bacillus anthracis str. A2012]	1.0E-36	[1..173]	[7..179]
gi\|23098182, gi\|... - gi\|23098182\|ref\|NP_691648.1\| hypothetical protein OB0727 [Oceanobacillus iheyensis HTE831], gi\|22776...	1.0E-35	[2..172]	[4..175]
gi\|89097158, gi\|... - gi\|89097158\|ref\|ZP_01170048.1\| Enzyme; dihydrofolate reductase family protein [Bacillus sp. NRRL B-1...	1.0E-35	[3..173]	[6..177]
gi\|25498209 - pir\|\|D97084 enzyme of dihydrofolate reductase family, ortholog YWFD B. subtilis [imported] - Clostri... gi\|15024442, gi\|... - gi\|15894774\|ref\|NP_348123.1\| dihydrofolate reductase [Clostridium acetobutylicum ATCC 824], gi\|15024...	2.0E-35	[2..173]	[4..176]

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Predicted Domain #1

Region A:
Residues: [1-173]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSREIVLFIA ASLDGYIAKE DDDLEWLMET EGEGDNGYTE MYETIDTIIM GKRTYDYVVE  60
   61 HMDIFPYVDK KCYVFSNSEK GSNEHAEFVN EDVVEFTKGL KAQEGSKIWM VGGGSLLREF 120
  121 FKNNLIDEYV VTITPHILGS GVPLFQDKNP EIHLTLTDTK RFGQFVNLYY KVK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.69897
Match:	2gd9A
Description:	No description for 2gd9A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits