YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|229268177, gi...
Organism:	Bacillus anthracis str. A0248
Length:	211 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|229268177, gi....

Description	E-value	Query Range	Subject Range
gi\|228855938, gi... - gi\|228903670\|ref\|ZP_04067790.1\| IMPACT family member yvyE [Bacillus thuringiensis IBL 4222], gi\|2288... gi\|228848687, gi... - gi\|228911032\|ref\|ZP_04074840.1\| IMPACT family member yvyE [Bacillus thuringiensis IBL 200], gi\|22884... gi\|228961435, gi... - gi\|228961435\|ref\|ZP_04123048.1\| IMPACT family member yvyE [Bacillus thuringiensis serovar pakistani ... gi\|75759037, gi\|... - gi\|75759037\|ref\|ZP_00739145.1\| Hypothetical protein RBTH_03569 [Bacillus thuringiensis serovar israe... gi\|228791389, gi... - gi\|228968312\|ref\|ZP_04129309.1\| IMPACT family member yvyE [Bacillus thuringiensis serovar sotto str.... gi\|228722515, gi... - gi\|229050859\|ref\|ZP_04194411.1\| IMPACT family member yvyE [Bacillus cereus AH676], gi\|228722515\|gb\|E... gi\|228670986, gi... - gi\|229112606\|ref\|ZP_04242143.1\| IMPACT family member yvyE [Bacillus cereus Rock1-15], gi\|228670986\|g... gi\|228652783, gi... - gi\|229130444\|ref\|ZP_04259400.1\| IMPACT family member yvyE [Bacillus cereus BDRD-Cer4], gi\|228652783\|... gi\|229147728, gi... - gi\|229147728\|ref\|ZP_04276071.1\| IMPACT family member yvyE [Bacillus cereus BDRD-ST24], gi\|228635741\|... gi\|218161230, gi... - gi\|218233273\|ref\|YP_002369973.1\| conserved hypothetical protein TIGR00257 [Bacillus cereus B4264], g... gi\|30023232, gi\|... - gi\|30023232\|ref\|NP_834863.1\| Xaa-Pro dipeptidase [Bacillus cereus ATCC 14579], gi\|29898792\|gb\|AAP120...	8.0E-57	[1..211]	[1..211]
gi\|65317168, gi\|... - gi\|65317168\|ref\|ZP_00390127.1\| COG1739: Uncharacterized conserved protein [Bacillus anthracis str. A...	7.0E-56	[1..211]	[1..211]
gi\|47568480, gi\|... - gi\|47569304\|ref\|ZP_00239989.1\| conserved hypothetical protein protein TIGR00257 [Bacillus cereus G92... gi\|228936483, gi... - gi\|228936483\|ref\|ZP_04099281.1\| IMPACT family member yvyE [Bacillus thuringiensis serovar andalousie... gi\|196039518, gi... - gi\|196039518\|ref\|ZP_03106823.1\| conserved hypothetical protein TIGR00257 [Bacillus cereus NVH0597-99...	8.0E-56	[1..211]	[1..211]
gi\|42784350, gi\|... - gi\|42784350\|ref\|NP_981597.1\| hypothetical protein BCE_5305 [Bacillus cereus ATCC 10987], gi\|42740281...	9.0E-56	[1..211]	[1..211]
gi\|228596111, gi... - gi\|229187407\|ref\|ZP_04314550.1\| IMPACT family member yvyE [Bacillus cereus BGSC 6E1], gi\|228596111\|g... gi\|228658798, gi... - gi\|229124703\|ref\|ZP_04253884.1\| IMPACT family member yvyE [Bacillus cereus 95/8201], gi\|228658798\|gb... gi\|229094291, gi... - gi\|229094291\|ref\|ZP_04225367.1\| IMPACT family member yvyE [Bacillus cereus Rock3-42], gi\|228689144\|g... gi\|228810671, gi... - gi\|228948915\|ref\|ZP_04111188.1\| IMPACT family member yvyE [Bacillus thuringiensis serovar monterrey ... gi\|51973838, gi\|... - gi\|52140369\|ref\|YP_086461.1\| hypothetical protein BCZK4891 [Bacillus cereus E33L], gi\|51973838\|gb\|AA... gi\|218906373, gi... - gi\|218906373\|ref\|YP_002454207.1\| conserved hypothetical protein TIGR00257 [Bacillus cereus AH820], g... gi\|196045661, gi... - gi\|196045661\|ref\|ZP_03112891.1\| conserved hypothetical protein TIGR00257 [Bacillus cereus 03BB108], ... gi\|118480233, gi... - gi\|118480233\|ref\|YP_897384.1\| hypothetical protein BALH_4691 [Bacillus thuringiensis str. Al Hakam],... gi\|228930198, gi... - gi\|228930198\|ref\|ZP_04093207.1\| IMPACT family member yvyE [Bacillus thuringiensis serovar pondicheri... gi\|228841849, gi... - gi\|228917800\|ref\|ZP_04081339.1\| IMPACT family member yvyE [Bacillus thuringiensis serovar pulsiensis... gi\|225867160, gi... - gi\|225867160\|ref\|YP_002752538.1\| conserved hypothetical protein TIGR00257 [Bacillus cereus 03BB102],...	1.0E-55	[1..211]	[1..211]
gi\|49480389, gi\|... - gi\|49480389\|ref\|YP_039185.1\| hypothetical protein BT9727_4876 [Bacillus thuringiensis serovar konkuk...	2.0E-55	[1..211]	[1..211]
gi\|152977406, gi... - gi\|89201180\|ref\|ZP_01179926.1\| Protein of unknown function UPF0029 [Bacillus cereus subsp. cytotoxis...	4.0E-55	[1..210]	[1..210]
gi\|56381529, gi\|... - gi\|56421687\|ref\|YP_149005.1\| hypothetical protein GK3152 [Geobacillus kaustophilus HTA426], gi\|56381...	6.0E-55	[1..207]	[1..207]
gi\|163942881, gi... - gi\|89205062\|ref\|ZP_01183635.1\| Protein of unknown function UPF0029 [Bacillus weihenstephanensis KBAB...	7.0E-55	[1..211]	[1..211]
gi\|16801721 - gi\|16801721\|ref\|NP_471989.1\| hypothetical protein lin2660 [Listeria innocua Clip11262] gi\|25303440, gi\|... - pir\|\|AF1764 conserved hypothetical protein homolog lin2660 [imported] - Listeria innocua (strain Cli...	3.0E-54	[1..210]	[1..210]

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Predicted Domain #1

Region A:
Residues: [1-211]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLQYLTIKG YGEHEIVIQK SRFICYVSRA TTEEEAQEFI QKIKKQNWNA THNCSAYLIG  60
   61 EQDQIQKAND DGEPSGTAGV PMLEVLKKRG LKDTVVVVTR YFGGIKLGAG GLIRAYGKCT 120
  121 SEGINHVGVV ERKLMRVMQT EIDYTLLGKI ENELRNSKYA IKDIHYLENV TFDTYVEEDG 180
  181 KQTFTDWMIE LTNGKCTITE GDMLYLEKDV I

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	45.221849
Match:	1vi7A
Description:	Crystal structure of an hypothetical protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.112026646106867	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: