YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|238861806, gi...
Organism:	Escherichia coli BW2952
Length:	194 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|238861806, gi....

Description	E-value	Query Range	Subject Range
gi\|187430071, gi... - gi\|187733079\|ref\|YP_001882552.1\| molybdopterin-guanine dinucleotide biosynthesis protein A [Shigella... gi\|81247613, gi\|... - gi\|82546202\|ref\|YP_410149.1\| molybdopterin-guanine dinucleotide biosynthesis protein A [Shigella boy...	167.0	[0..1]	[194..1]
gi\|11513939 - gi\|11513939\|pdb\|1E5K\|A Chain A, Crystal Structure Of The Molybdenum Cofactor Biosynthesis Protein Mo...	167.0	[0..1]	[194..1]
gi\|73857840, gi\|... - gi\|74314363\|ref\|YP_312782.1\| molybdopterin-guanine dinucleotide biosynthesis protein A [Shigella son...	165.0	[0..1]	[194..1]
gi\|24054421, gi\|... - gi\|24115146\|ref\|NP_709656.1\| molybdopterin-guanine dinucleotide biosynthesis protein A [Shigella fle... gi\|30064853, gi\|... - gi\|30064853\|ref\|NP_839024.1\| molybdopterin-guanine dinucleotide biosynthesis protein A [Shigella fle...	165.0	[0..1]	[194..1]
gi\|28898271, gi\|... - gi\|28898271\|ref\|NP_797876.1\| molybdopterin-guanine dinucleotide biosynthesis protein A [Vibrio parah... gi\|28806488 - gi\|28806488\|dbj\|BAC59760.1\| molybdopterin-guanine dinucleotide biosynthesis protein A [Vibrio paraha...	164.0	[0..1]	[189..13]
gi\|75855502, gi\|... - gi\|75855502\|ref\|ZP_00763151.1\| COG0746: Molybdopterin-guanine dinucleotide biosynthesis protein A [V... gi\|149748873, gi... - gi\|153837768\|ref\|ZP_01990435.1\| molybdopterin-guanine dinucleotide biosynthesis protein A [Vibrio pa... MOBA_VIBPA - Molybdenum cofactor guanylyltransferase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 22106... MOBA_VIBPA - Probable molybdopterin-guanine dinucleotide biosynthesis protein A OS=Vibrio parahaemolyticus GN=mob...	164.0	[0..1]	[189..1]

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Predicted Domain #1

Region A:
Residues: [1-194]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLMTTITGV VLAGGKARRM GGVDKGLLEL NGKPLWQHVA DALMTQLSHV VVNANRHQEI  60
   61 YQASGLKVIE DSLADYPGPL AGMLSVMQQE AGEWFLFCPC DTPYIPPDLA ARLNHQRKDA 120
  121 PVVWVHDGER DHPTIALVNR AIEPLLLEYL QAGERRVMVF MRLAGGHAVD FSDHKDAFVN 180
  181 VNTPEELARW QEKR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.69897
Match:	1e5kA
Description:	Molybdenum cofactor biosynthesis protein MobA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.25720704697246	bayes_pls_golite062009
transferase activity	1.67251862595728	bayes_pls_golite062009
nucleotidyltransferase activity	0.67147527259372	bayes_pls_golite062009
transferase activity, transferring hexosyl groups	0.140401836041937	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	0.120443376947599	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: