YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|253569647, gi...
Organism:	Bacteroides sp. 1_1_6
Length:	124 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|253569647, gi....

Description	E-value	Query Range	Subject Range
gi\|88941515, gi\|... - gi\|88941515\|ref\|ZP_01146929.1\| crcB protein [Acidiphilium cryptum JF-5], gi\|88919772\|gb\|EAR38909.1\| ...	115.0	[0..1]	[123..69]
gi\|218900224, gi... - gi\|218900224\|ref\|YP_002448635.1\| crcB protein [Bacillus cereus G9842], gi\|218540671\|gb\|ACK93065.1\| c... gi\|75760557, gi\|... - gi\|75760557\|ref\|ZP_00740591.1\| CrcB family protein [Bacillus thuringiensis serovar israelensis ATCC ... gi\|228791497, gi... - gi\|228968194\|ref\|ZP_04129194.1\| Protein crcB 1 [Bacillus thuringiensis serovar sotto str. T04001], g... gi\|228903577, gi... - gi\|228903577\|ref\|ZP_04067698.1\| Protein crcB 1 [Bacillus thuringiensis IBL 4222], gi\|228856006\|gb\|EE...	110.0	[0..4]	[122..12]
gi\|67545817, gi\|... - gi\|67545817\|ref\|ZP_00423736.1\| Camphor resistance CrcB protein [Burkholderia vietnamiensis G4], gi\|6...	110.0	[0..4]	[122..101]
CRCB_GEOSL - Protein CrcB homolog OS=Geobacter sulfurreducens GN=crcB PE=3 SV=1 CRCB_GEOSL - Protein CrcB homolog OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=crcB PE=3 ...	110.0	[0..2]	[124..17]
gi\|30692518, gi\|... - gi\|30692518\|gb\|AAP33390.1\| CrcB [Bacillus thuringiensis serovar aizawai], gi\|221665115\|gb\|ACM24761.1...	109.0	[0..3]	[122..29]
CRCB_GEODF - Putative fluoride ion transporter CrcB OS=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32)...	108.0	[0..2]	[123..1]
gi\|166852950, gi... - gi\|167038710\|ref\|YP_001661695.1\| CrcB protein [Thermoanaerobacter sp. X514], gi\|166852950\|gb\|ABY9135... gi\|241883051, gi... - gi\|241904583\|ref\|ZP_04789268.1\| CrcB protein [Thermoanaerobacter brockii subsp. finnii Ako-1], gi\|24... gi\|242258471, gi... - gi\|242258471\|ref\|ZP_04803270.1\| CrcB protein [Thermoanaerobacter sp. X513], gi\|242230005\|gb\|EES32417... gi\|167038577, gi... - gi\|76795537\|ref\|ZP_00777910.1\| Camphor resistance CrcB protein [Thermoanaerobacter ethanolicus ATCC ...	107.0	[0..3]	[124..1]
gi\|89321322, gi\|... - gi\|89337738\|ref\|ZP_01190516.1\| Camphor resistance CrcB protein [Mycobacterium flavescens PYR-GCK], g...	107.0	[0..3]	[124..6]
gi\|47555936, gi\|... - gi\|47567315\|ref\|ZP_00238028.1\| crcB protein [Bacillus cereus G9241], gi\|47555936\|gb\|EAL14274.1\| crcB...	107.0	[0..4]	[122..5]
CRCB1_BACC1 - Putative fluoride ion transporter CrcB 1 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=crcB1 P...	107.0	[0..4]	[122..5]

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Predicted Domain #1

Region A:
Residues: [1-124]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKTLLFIGM GSFTGGVLRY LISRYVQNFL TPSFPLGTLL VNVLGCFAIG LFYGLFERGN  60
   61 LMNPNLRMFL TVGFCGGFTT FSTFMNENFQ LIKDDNFFYL SLYVGLSLFV GFIMLYLGYS 120
  121 LVKQ

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	34.886057
Match:	PF02537.6
Description:	No description for PF02537.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits