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View Structure Prediction Details

Protein: Y4523_ARATH
Organism: Arabidopsis thaliana
Length: 512 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y4523_ARATH.

Description E-value Query
Range
Subject
Range
gi|7270475, gi|7... - pir||T06134 hypothetical protein F23E12.210 - Arabidopsis thaliana, gi|7270475|emb|CAB80240.1| putat...
293.0 [0..1] [512..1]

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Predicted Domain #1
Region A:
Residues: [1-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCCQSLFSG DNPLGKDGVQ PQPLSQNNHG GATTADNGGS GGASGVGGGG GGGGIPSFSE  60
   61 FSFADLKAAT NNFSSDNIVS ESGEKAPNLV YKGRLQNRRW IAVKKFTKMA WPEPKQFAEE 120
  121 AWGVGKLRHN RLANLIGYCC DGDERLLVAE FMPNDTLAKH LFHWENQTIE WAMRLRVGYY 180
  181 IAEALDYCST EGRPLYHDLN AYRVLFDEDG DPRLSCFGLM KNSRDGKSYS TNLAYTPPEY 240
  241 LRNGRVTPES VTYSFGTVLL DLLSGKHIPP SHALDMIRGK NIILLMDSHL EGKFSTEEAT 300
  301 VVVELASQCL QYEPRERPNT KDLVATLAPL QTKSDVPSYV MLGIKKQEEA P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.39794
Match: 2qkwB
Description: No description for 2qkwB was found.

Predicted Domain #2
Region A:
Residues: [352-512]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STPQRPLSPL GEACSRMDLT AIHQILVMTH YRDDEGTNEL SFQEWTQQMK DMLDARKRGD  60
   61 QSFREKDFKT AIDCYSQFID VGTMVSPTVF GRRSLCYLLC DQPDAALRDA MQAQCVYPDW 120
  121 PTAFYMQSVA LAKLNMNTDA ADMLNEAAQL EEKRQRGGRG S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.30103
Match: 1na0A
Description: Designed protein cTPR3
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle