YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DCDA2_ARATH
Organism: Arabidopsis thaliana
Length: 489 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DCDA2_ARATH.

Description E-value Query
Range
Subject
Range
gi|11357248, gi|... - gi|7573355|emb|CAB87661.1| diaminopimelate decarboxylase-like protein [Arabidopsis thaliana], pir||T...
420.0 [0..1] [489..1]

Back

Predicted Domain #1
Region A:
Residues: [1-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVTQFLSQ PSSIRGTLNQ YQLNQTSLSR IPFLSLKSTL KPLKRLSVKA AVSQNSTKTL  60
   61 TKESASSFDH CFKKSSDGFL YCEGTKVQDI METVEKRPFY LYSKPQITRN LEAYKEALEG 120
  121 VRSVIGYAIK ANNNLKILEH LRSLGCGAVL VSGNELRLAL LAGFDPTKCI FNGNGKSLED 180
  181 LVLAAQEGVF VNVDSEFDLN NIVEASRISG KQVNVLLRIN PDVDPQVHPY VATGNKNSKF 240
  241 GIRNEKLQWF LDEVKAHPKE LKLVGAHCHL GSTITKVDIF RDAAVLMIEY IDEIRRQGFE 300
  301 VSYLNIGGGL GIDYYHAGAV LPTPMDLINT VRELVLSRDL NLIIEPGRSL IANTCCFVNH 360
  361 VTGVKTNGTK NFIVIDGSMA ELIRPSLYDA YQHIELVSPT PPEAEVTKFD VVGPVCESAD 420
  421 FLGKDRELPT PPQGAGLVVH DAGAYCMSMA STYNLKMRPP EYWVEEDGSI TKIRHAETFD 480
  481 DHLRFFEGL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 104.0
Match: 2p3eA
Description: No description for 2p3eA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle