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View Structure Prediction Details

Protein: AOC4_ARATH
Organism: Arabidopsis thaliana
Length: 254 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AOC4_ARATH.

Description E-value Query
Range
Subject
Range
AOC3_ARATH - Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1
415.0 [0..1] [254..1]

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Predicted Domain #1
Region A:
Residues: [1-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMASSAAAS ISMITLRNLS RNHQSHQSTF LGFSRSFHNQ RISSNSPGLS TRARSTTSST  60
   61 GGFFRTICSS SSNDYSRPTK IQELNVYEFN EGDRNSPAVL KLGKKPDQLC LGDLVPFTNK 120
  121 LYTGDLTKRI GITAGLCVLI QHVPEKKGDR FEASYSFYFG DYGHISVQGP YLTYEDTFLA 180
  181 ITGGSGVFEG AYGQVKLRQL VYPTKLFYTF YLKGVAADLP VELTGKHVEP SKEVKPAAEA 240
  241 QATQPGATIA NFTN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.30103
Match: 1z8kA
Description: X-ray structure of allene oxide cyclase from Arabidopsis thaliana at3g25770
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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