| Protein: | gi|18399975, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 447 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18399975, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
482.0 | [0..2] | [446..1264] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MSNYRGDDAE YMEDVDDEME DVEDDMDEEF RGDDLGASDS DVEEFDYSNN KVADTTAEQA 60
61 RKGKDIQGIP WDRLNISREK YRQTRLEQYK NYENVPNSGE SSEKVCKVTQ KGGLFYDFWR 120
121 NSRSIKSTIL H
|
| Detection Method: |  |
| Confidence: | 17.045757 |
| Match: | 1s4uX |
| Description: | Crystal Structure analysis of the beta-propeller protein Ski8p |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [132-447] |
1 11 21 31 41 51
| | | | | |
1 FQLRNLVWAT SKHDVYLMSN FLVTHYSSLT SGKHEVLNVR GHVAPSEKHP GSLLEGFTQT 60
61 QVSTLAVKDD FLVAGGFQGE LICKHLDRPG VSFCSRMTYD DNAITNAIEI YNKPSGALHF 120
121 TASNNDCGVR DFDMERYQLV KHFRFPWPVN HASLSPDGKL LAIVGDNPEG LIVDPNTGKT 180
181 LETLSGHLDF SFASAWHPDG VTFSTGNQDK TCRVWDIRNL SQSVTVLKGN LGAIRSIRYT 240
241 SDGKYMAMAE PADFVHVYDV SNGYETEQEI DFFGEISGIS FSPDTEALFI GVWDRTYGSL 300
301 LEFGRRRNYS YLDSYL
|
| Detection Method: | |
| Confidence: | 71.522879 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.407313201902664 | bayes_pls_golite062009 |
| protein binding | 0.0109071915022965 | bayes_pls_golite062009 |
