| Protein: | LCBK1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 763 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LCBK1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
571.0 | [0..1] | [715..1] |
|
|
480.0 | [0..8] | [757..31] |
|
|
436.0 | [0..36] | [763..31] |
|
|
271.0 | [0..99] | [603..64] |
|
|
270.0 | [0..99] | [603..228] |
|
|
270.0 | [0..99] | [603..228] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MQKSGVNRNP SLKVAIPQAQ QSLRRLGFCS QIATGGSQQS SPIVFPEKRN KKVKASSRRG 60
61 EVTNDPQVKP KPDEHRIDIG GGDEKSDLLG SLVYAGKLVL DKRKSASGKD ATEIQQP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [118-246] |
1 11 21 31 41 51
| | | | | |
1 AATDISIKKA VDAKLTSSAL VWGSDMLQLN DVVSVTYNVG LRHFTVHAYP IGKGSCGLSC 60
61 FTKPKRSRKD FRFVAPTVEE AVQWVASFGD QQCFINCLPH PLVAKKQASS ELFSVPIDTP 120
121 PELVFRCKS
|
| Detection Method: | |
| Confidence: | 11.0 |
| Match: | 1r79A |
| Description: | Solution Structure of The C1 Domain of The Human Diacylglycerol Kinase Delta |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [247-557] |
1 11 21 31 41 51
| | | | | |
1 APKMLVILNP RSGHGRSIKV FHNVVEPIFK LAGIKMEVVK TTKAGHAREL ASTVDINLCS 60
61 DGIICVGGDG IINEVLNGLL TRSNPKEGVS IPIGIVPAGS DNSLVWTVLG VRDPISAALS 120
121 IVKGGLTATD VFAVEWIHTG IIHFGMTVSY YGFVSDVLEL SEKYQKRFGP LRYFVAGFLK 180
181 FMCLPKYSYE VEYLPAQKED AEGKIRLEKE AVDMQDLYTD VMRRSSREGF PRASSLSSID 240
241 SIMTPSVGEL DTCSSTHAST EPSEYVRGID PKMKRLSSGR RDVTAEPEVI HPQAQSTTPN 300
301 WPRTRSKSRM D
|
| Detection Method: | |
| Confidence: | 41.0 |
| Match: | 2jgrA |
| Description: | No description for 2jgrA was found. |
|
Region A: Residues: [558-763] |
1 11 21 31 41 51
| | | | | |
1 KGWMGLTSVQ DPPTRCSWGN TGGQDREDIS STVSDPGPIW DAGPKWDTEP SAWDVENSIE 60
61 LPGPPEDIET GLRKQSITPI FEDKWVSRKG HFLGIMVCNH ACRTVQSSQV VAPNSEHDDG 120
121 TMDMLLVHGC GRLRLLRFFI LLQTGRHLSL PYVECVKVKS VKIKAGKNTH DSCGIDGELF 180
181 ALHGEVISTM LPEQCRLIGN APGRHS
|
| Detection Method: | |
| Confidence: | 3.07 |
| Match: | 2bonA |
| Description: | No description for 2bonA was found. |
