YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|238901229, gi...
Organism: Escherichia coli BW2952
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|238901229, gi....

Description E-value Query
Range
Subject
Range
gi|73809591 - gi|73809591|gb|AAZ85716.1| glucose-1-phosphate thymidylyltransferase [Escherichia coli]
328.0 [0..1] [293..1]
gi|237704493, gi... - gi|237704493|ref|ZP_04534974.1| glucose-1-phosphate thymidylyltransferase [Escherichia sp. 3_2_53FAA...
gi|117624235, gi... - gi|117624235|ref|YP_853148.1| glucose-1-phosphate thymidylyltransferase [Escherichia coli APEC O1], ...
327.0 [0..1] [291..1]
gi|46985 - gi|46985|emb|CAA43074.1| glucose-1-phosphate thymidylyltransferase [Salmonella enterica]
gi|96668 - pir||S23342 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) [validated] - Salmonella cholera...
RMLA_SALAN - Glucose-1-phosphate thymidylyltransferase OS=Salmonella anatum GN=rmlA PE=3 SV=1
326.0 [0..1] [291..1]
gi|9957817 - gi|9957817|gb|AAG09500.1|AF279615_3 glucose-1-phosphate thymidylyltransferase [Salmonella enterica]
325.0 [0..1] [291..1]
gi|91072897, gi|... - gi|91211323|ref|YP_541309.1| glucose-1-phosphate thymidylyltransferase [Escherichia coli UTI89], gi|...
324.0 [0..1] [291..1]

Back

Predicted Domain #1
Region A:
Residues: [1-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMRKGIILA GGSGTRLYPV TMAVSKQLLP IYDKPMIYYP LSTLMLAGIR DILIISTPQD  60
   61 TPRFQQLLGD GSQWGLNLQY KVQPSPDGLA QAFIIGEEFI GGDDCALVLG DNIFYGHDLP 120
  121 KLMEAAVNKE SGATVFAYHV NDPERYGVVE FDKNGTAISL EEKPLEPKSN YAVTGLYFYD 180
  181 NDVVQMAKNL KPSARGELEI TDINRIYLEQ GRLSVAMMGR GYAWLDTGTH QSLIEASNFI 240
  241 ATIEERQGLK VSCPEEIAFR KGFIDVEQVR KLAVPLIKNN YGQYLYKMTK DSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.0
Match: 1h5rA
Description: RmlA (RfbA)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
uridylyltransferase activity 3.74072767898515 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 2.70047942699289 bayes_pls_golite062009
UTP:glucose-1-phosphate uridylyltransferase activity 2.65167602524122 bayes_pls_golite062009
UTP-monosaccharide-1-phosphate uridylyltransferase activity 2.46432078102948 bayes_pls_golite062009
UDP-glycosyltransferase activity 2.33861720107822 bayes_pls_golite062009
transferase activity 2.17535315350752 bayes_pls_golite062009
catalytic activity 1.88676710996045 bayes_pls_golite062009
acetylgalactosaminyltransferase activity 1.33788133706753 bayes_pls_golite062009
nucleotidyltransferase activity 1.17054423506287 bayes_pls_golite062009
polypeptide N-acetylgalactosaminyltransferase activity 1.10309252319727 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.02084820914491 bayes_pls_golite062009
cytidylyltransferase activity 0.983416157001861 bayes_pls_golite062009
mannosyltransferase activity 0.91123217364068 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 0.897978517422275 bayes_pls_golite062009
UDP-N-acetylglucosamine diphosphorylase activity 0.513376694534047 bayes_pls_golite062009
mannose-phosphate guanylyltransferase activity 0.2363835251362 bayes_pls_golite062009
guanylyltransferase activity 0.0539392112504681 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle