YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|227114945
Organism:	Pectobacterium carotovorum subsp. brasiliensis PBR1692
Length:	61 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|227114945.

Description	E-value	Query Range	Subject Range
gi\|88773955, gi\|... - gi\|88794830\|ref\|ZP_01110535.1\| carbon storage regulator [Alteromonas macleodii 'Deep ecotype'], gi\|8...	103.0	[0..1]	[55..31]
CSRA_SHEDO - Carbon storage regulator homolog OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 150...	102.0	[0..1]	[60..1]
gi\|165922322, gi... - gi\|165925710\|ref\|ZP_02221542.1\| carbon storage regulator [Yersinia pestis biovar Orientalis str. F19... gi\|165990932, gi... - gi\|166010025\|ref\|ZP_02230923.1\| carbon storage regulator [Yersinia pestis biovar Antiqua str. E19790... CSRA_PHOLL - Carbon storage regulator homolog OS=Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CI... gi\|45435095, gi\|... - gi\|45440239\|ref\|NP_991778.1\| carbon storage regulator [Yersinia pestis biovar Microtus str. 91001], ... gi\|21957618, gi\|... - gi\|22124794\|ref\|NP_668217.1\| carbon storage regulator [Yersinia pestis KIM], gi\|21957618\|gb\|AAM84468... gi\|15981234, gi\|... - gi\|218930325\|ref\|YP_002348200.1\| carbon storage regulator [Yersinia pestis CO92], gi\|16123457\|ref\|NP... CSRA_YERPS - Carbon storage regulator homolog OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=csrA ... gi\|77976226 - gi\|77976226\|ref\|ZP_00831737.1\| COG1551: Carbon storage regulator (could also regulate swarming and q... gi\|238725283, gi... - gi\|77975907\|ref\|ZP_00831440.1\| COG1551: Carbon storage regulator (could also regulate swarming and q... gi\|77961319 - gi\|77961319\|ref\|ZP_00825159.1\| COG1551: Carbon storage regulator (could also regulate swarming and q... gi\|77958680 - gi\|77958680\|ref\|ZP_00822709.1\| COG1551: Carbon storage regulator (could also regulate swarming and q... gi\|77632996 - gi\|77632996\|ref\|ZP_00795155.1\| COG1551: Carbon storage regulator (could also regulate swarming and q... gi\|166212971, gi... - gi\|166212971\|ref\|ZP_02239006.1\| carbon storage regulator [Yersinia pestis biovar Antiqua str. B42003... CSRA_YERE8 - Carbon storage regulator homolog OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 1... gi\|167051945, gi... - gi\|167399441\|ref\|ZP_02304965.1\| carbon storage regulator [Yersinia pestis biovar Antiqua str. UG05-0... gi\|167421668, gi... - gi\|167421668\|ref\|ZP_02313421.1\| carbon storage regulator [Yersinia pestis biovar Orientalis str. MG0... gi\|167057770, gi... - gi\|167423600\|ref\|ZP_02315353.1\| carbon storage regulator [Yersinia pestis biovar Mediaevalis str. K1... CSRA_YERPY - Carbon storage regulator homolog OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=csrA ... CSRA_YERPB - Carbon storage regulator homolog OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=csrA P... gi\|153997649, gi... - gi\|153997649\|ref\|ZP_02022749.1\| carbon storage regulator [Yersinia pestis CA88-4125], gi\|149289286\|g... CSRA_YERPP - Carbon storage regulator homolog OS=Yersinia pestis (strain Pestoides F) GN=csrA PE=3 SV=1 CSRA_YERPS - Carbon storage regulator homolog OS=Yersinia pseudotuberculosis GN=csrA PE=3 SV=1 CSRA_YERP3 - Carbon storage regulator homolog OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=c... gi\|229838924, gi... - gi\|229838924\|ref\|ZP_04459083.1\| post transcriptional regulatory RNA-binding protein [Yersinia pestis... gi\|229896405, gi... - gi\|229896405\|ref\|ZP_04511573.1\| post transcriptional regulatory RNA-binding protein [Yersinia pestis... gi\|229899491, gi... - gi\|229899491\|ref\|ZP_04514632.1\| post transcriptional regulatory RNA-binding protein [Yersinia pestis... gi\|238753176, gi... - gi\|238753176\|ref\|ZP_04614618.1\| Carbon storage regulator [Yersinia rohdei ATCC 43380], gi\|238708603\|... gi\|238705507, gi... - gi\|238756252\|ref\|ZP_04617568.1\| Carbon storage regulator [Yersinia ruckeri ATCC 29473], gi\|238705507... gi\|238758258, gi... - gi\|238758258\|ref\|ZP_04619437.1\| Carbon storage regulator [Yersinia aldovae ATCC 35236], gi\|238703588... gi\|238700250, gi... - gi\|238761736\|ref\|ZP_04622711.1\| Carbon storage regulator [Yersinia kristensenii ATCC 33638], gi\|2387... gi\|253990684, gi... - gi\|253990684\|ref\|YP_003042040.1\| Carbon storage regulator [Photorhabdus asymbiotica], gi\|253782134\|e... gi\|165915256, gi... - gi\|89105928\|ref\|ZP_01178440.1\| COG1551: Carbon storage regulator (could also regulate swarming and q... CSRA_YERPE - Carbon storage regulator homolog OS=Yersinia pestis GN=csrA PE=3 SV=1 CSRA_YERPN - Carbon storage regulator homolog OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=csrA PE=3 SV=1 CSRA_PHOLL - Carbon storage regulator homolog OS=Photorhabdus luminescens subsp. laumondii GN=csrA PE=3 SV=1	102.0	[0..1]	[61..1]
gi\|227161929, gi... - gi\|227357819\|ref\|ZP_03842167.1\| carbon storage regulator [Proteus mirabilis ATCC 29906], gi\|22716192... CSRA_PROMI - Carbon storage regulator homolog OS=Proteus mirabilis GN=csrA PE=3 SV=1 CSRA_PROMH - Carbon storage regulator homolog OS=Proteus mirabilis (strain HI4320) GN=csrA PE=3 SV=1 gi\|226328740, gi... - gi\|226328740\|ref\|ZP_03804258.1\| hypothetical protein PROPEN_02640 [Proteus penneri ATCC 35198], gi\|2...	102.0	[0..1]	[59..1]
CSRA_PSYWF - Carbon storage regulator homolog OS=Psychrobacter sp. (strain PRwf-1) GN=csrA PE=3 SV=1	102.0	[0..1]	[59..1]
CSRA_SALPC - Carbon storage regulator OS=Salmonella paratyphi C (strain RKS4594) GN=csrA PE=3 SV=1 CSRA_ECOLU - Carbon storage regulator OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=csrA PE=3 SV=1 CSRA_SALPA - Carbon storage regulator OS=Salmonella paratyphi A GN=csrA PE=3 SV=1 CSRA_SALCH - Carbon storage regulator OS=Salmonella choleraesuis GN=csrA PE=3 SV=1 CSRA_SALAR - Carbon storage regulator OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=csrA ... CSRA_ENT38 - Carbon storage regulator homolog OS=Enterobacter sp. (strain 638) GN=csrA PE=3 SV=1 CSRA_ECOLC - Carbon storage regulator OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=csrA PE=3 SV=... gi\|124500954, gi... - gi\|124528062\|ref\|ZP_01699415.1\| carbon storage regulator, CsrA [Escherichia coli B], gi\|124500954\|gb... EG11447 - pleiotropic regulatory protein for carbon source metabolism / Global regulator of carbon source meta... CSRA_SALTY - Carbon storage regulator OS=Salmonella typhimurium GN=csrA PE=3 SV=1 CSRA_SALPB - Carbon storage regulator OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=csrA PE=3 SV=1 gi\|208812192, gi... - gi\|208812192\|ref\|ZP_03253521.1\| carbon storage regulator [Escherichia coli O157:H7 str. EC4045], gi\|... gi\|208806912, gi... - gi\|208806912\|ref\|ZP_03249249.1\| carbon storage regulator [Escherichia coli O157:H7 str. EC4206], gi\|... CSRA_ECO5E - Carbon storage regulator OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=csrA PE=3 SV=1 gi\|208821304, gi... - gi\|208821304\|ref\|ZP_03261624.1\| carbon storage regulator [Escherichia coli O157:H7 str. EC4042], gi\|... CSRA_ECOSE - Carbon storage regulator OS=Escherichia coli (strain SE11) GN=csrA PE=3 SV=1 gi\|209896784, gi... - gi\|209909707\|ref\|ZP_03284191.1\| hypothetical protein ENTCAN_04013 [Enterobacter cancerogenus ATCC 35... gi\|213052377 - gi\|213052377\|ref\|ZP_03345255.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... gi\|213021624 - gi\|213021624\|ref\|ZP_03336071.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... CSRA_SALPK - Carbon storage regulator OS=Salmonella paratyphi A (strain AKU_12601) GN=csrA PE=3 SV=1 gi\|197264486, gi... - gi\|197264486\|ref\|ZP_03164560.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... gi\|200387895, gi... - gi\|200387895\|ref\|ZP_03214507.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... CSRA_SALDC - Carbon storage regulator OS=Salmonella dublin (strain CT_02021853) GN=csrA PE=3 SV=1 CSRA_SALG2 - Carbon storage regulator OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=csrA PE=3 SV=1 gi\|204928217, gi... - gi\|204928217\|ref\|ZP_03219417.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... gi\|228554276, gi... - gi\|228554276\|gb\|EEK18941.1\| hypothetical protein CIT292_04175 [Citrobacter youngae ATCC 29220], gi\|2... CSRA_SALEP - Carbon storage regulator OS=Salmonella enteritidis PT4 (strain P125109) GN=csrA PE=3 SV=1 gi\|227888230, gi... - gi\|227888230\|ref\|ZP_04006035.1\| carbon storage regulator [Escherichia coli 83972], gi\|227834499\|gb\|E... CSRA_KLEP3 - Carbon storage regulator homolog OS=Klebsiella pneumoniae (strain 342) GN=csrA PE=3 SV=1 gi\|226899724, gi... - gi\|237706684\|ref\|ZP_04537165.1\| carbon storage regulator [Escherichia sp. 3_2_53FAA], gi\|226899724\|g... gi\|217327065, gi... - gi\|217327065\|ref\|ZP_03443148.1\| carbon storage regulator [Escherichia coli O157:H7 str. TW14588], gi... gi\|237729650, gi... - gi\|237729650\|ref\|ZP_04560131.1\| carbon storage regulator [Citrobacter sp. 30_2], gi\|226908256\|gb\|EEH... CSRA_ECO27 - Carbon storage regulator OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=csrA PE=3 SV=1 gi\|238896147, gi... - gi\|238896147\|ref\|YP_002920883.1\| carbon storage regulator [Klebsiella pneumoniae NTUH-K2044], gi\|238... CSRA_ECO8A - Carbon storage regulator OS=Escherichia coli O8 (strain IAI1) GN=csrA PE=3 SV=1 CSRA_ECOBW - Carbon storage regulator OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=csrA PE=3 SV=1 CSRA_ESCF3 - Carbon storage regulator OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=... gi\|238909592 - gi\|238909592\|ref\|ZP_04653429.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... CSRA_ECO81 - Carbon storage regulator OS=Escherichia coli O81 (strain ED1a) GN=csrA PE=3 SV=1 gi\|242378253, gi... - gi\|251785980\|ref\|YP_003000284.1\| hypothetical protein B21_02511 [Escherichia coli BL21], gi\|24237825... CSRA_ECO45 - Carbon storage regulator OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=csrA PE=3 SV=1 gi\|253772449, gi... - gi\|254289388\|ref\|YP_003055136.1\| carbon storage regulator [Escherichia coli BL21(DE3)], gi\|253978695... CSRA_ECO7I - Carbon storage regulator OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=csrA PE=3 SV=1 gi\|254037734, gi... - gi\|254037734\|ref\|ZP_04871792.1\| pleiotropic regulatory protein for carbon source metabolism [Escheri... CSRA_ECO55 - Carbon storage regulator OS=Escherichia coli (strain 55989 / EAEC) GN=csrA PE=3 SV=1 gi\|254162627, gi... - gi\|254162627\|ref\|YP_003045735.1\| carbon storage regulator [Escherichia coli B str. REL606], gi\|25397... gi\|213426120 - gi\|213426120\|ref\|ZP_03358870.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... gi\|254794637, gi... - gi\|254794637\|ref\|YP_003079474.1\| post transcriptional regulatory RNA-binding protein [Escherichia co... gi\|213420408 - gi\|213420408\|ref\|ZP_03353474.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... gi\|213622610 - gi\|213622610\|ref\|ZP_03375393.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... gi\|213579903 - gi\|213579903\|ref\|ZP_03361729.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... gi\|213852308 - gi\|213852308\|ref\|ZP_03381840.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... gi\|213648834 - gi\|213648834\|ref\|ZP_03378887.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... gi\|214000007 - gi\|214000007\|ref\|ZP_03410742.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... gi\|213973299 - gi\|213973299\|ref\|ZP_03400558.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... gi\|205334423, gi... - gi\|205334423\|gb\|EDZ21187.1\| carbon storage regulator [Salmonella enterica subsp. enterica serovar Ke... gi\|205324811, gi... - gi\|205324811\|gb\|EDZ12650.1\| carbon storage regulator [Salmonella enterica subsp. enterica serovar Sa... gi\|205349171, gi... - gi\|205349171\|gb\|EDZ35802.1\| carbon storage regulator [Salmonella enterica subsp. enterica serovar Ha... gi\|168245265, gi... - gi\|205335997\|gb\|EDZ22761.1\| carbon storage regulator [Salmonella enterica subsp. enterica serovar He... gi\|283786757\|ref... - carbon storage regulator [Citrobacter rodentium ICC168] gi\|168749983, gi... - gi\|188015826\|gb\|EDU53948.1\| carbon storage regulator [Escherichia coli O157:H7 str. EC4113], gi\|1687... gi\|195633392, gi... - gi\|195633392\|gb\|EDX51806.1\| carbon storage regulator [Salmonella enterica subsp. enterica serovar Ne... gi\|189366837, gi... - gi\|189366837\|gb\|EDU85253.1\| carbon storage regulator [Escherichia coli O157:H7 str. EC4501], gi\|1687... CSRA_ECOLI - Carbon storage regulator - Escherichia coli gi\|189357262, gi... - gi\|189357262\|gb\|EDU75681.1\| carbon storage regulator [Escherichia coli O157:H7 str. EC4401], gi\|1687... CSRA_CITK8 - Carbon storage regulator homolog OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696... CSRA_CROS8 - Carbon storage regulator homolog OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=csrA PE=3 SV=1 CSRA_KLEP7 - Carbon storage regulator homolog OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MG... CSRA_SHIF8 - Carbon storage regulator OS=Shigella flexneri serotype 5b (strain 8401) GN=csrA PE=3 SV=1 CSRA_SHIB3 - Carbon storage regulator OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=csrA PE=3 SV... gi\|170125058, gi... - gi\|170765912\|ref\|ZP_02900723.1\| carbon storage regulator [Escherichia albertii TW07627], gi\|17012505... CSRA_SALHS - Carbon storage regulator OS=Salmonella heidelberg (strain SL476) GN=csrA PE=3 SV=1 CSRA_SALNS - Carbon storage regulator OS=Salmonella newport (strain SL254) GN=csrA PE=3 SV=1 gi\|1800082, gi\|8... - gi\|89109483\|ref\|AP_003263.1\| pleiotropic regulatory protein for carbon source metabolism [Escherichi... CSRA_SALSV - Carbon storage regulator OS=Salmonella schwarzengrund (strain CVM19633) GN=csrA PE=3 SV=1 CSRA_ECOUT - Carbon storage regulator OS=Escherichia coli (strain UTI89 / UPEC) GN=csrA PE=3 SV=1 gi\|194472390, gi... - gi\|194472390\|ref\|ZP_03078374.1\| carbon storage regulator [Salmonella enterica subsp. enterica serova... gi\|15832807, gi\|... - gi\|15832807\|ref\|NP_311580.1\| carbon storage regulator [Escherichia coli O157:H7 str. Sakai], gi\|1336... CSRA_SALA4 - Carbon storage regulator OS=Salmonella agona (strain SL483) GN=csrA PE=3 SV=1 CSRA_ECOL5 - Carbon storage regulator OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=csrA PE=3 SV=1 gi\|195938444 - gi\|195938444\|ref\|ZP_03083826.1\| carbon storage regulator [Escherichia coli O157:H7 str. EC4024] gi\|187769629, gi... - gi\|187769629\|gb\|EDU33473.1\| carbon storage regulator [Escherichia coli O157:H7 str. EC4196], gi\|1687... gi\|189362077, gi... - gi\|189362077\|gb\|EDU80496.1\| carbon storage regulator [Escherichia coli O157:H7 str. EC4486], gi\|1687... gi\|189372235, gi... - gi\|189372235\|gb\|EDU90651.1\| carbon storage regulator [Escherichia coli O157:H7 str. EC869], gi\|16878... gi\|189003298, gi... - gi\|189003298\|gb\|EDU72284.1\| carbon storage regulator [Escherichia coli O157:H7 str. EC4076], gi\|1687... gi\|205342923, gi... - gi\|205342923\|gb\|EDZ29687.1\| carbon storage regulator [Salmonella enterica subsp. enterica serovar We... gi\|168800227, gi... - gi\|189377512\|gb\|EDU95928.1\| carbon storage regulator [Escherichia coli O157:H7 str. EC508], gi\|16880... CSRA_ECOSM - Carbon storage regulator OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=csrA PE=3 SV=1 CSRA_ECODH - Carbon storage regulator OS=Escherichia coli (strain K12 / DH10B) GN=csrA PE=3 SV=1 CSRA_SALTI - Carbon storage regulator OS=Salmonella typhi GN=csrA PE=3 SV=1 CSRA_SALTY - Carbon storage regulator OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=csrA PE=... gi\|24113994, gi\|... - gi\|24113994\|ref\|NP_708504.1\| carbon storage regulator [Shigella flexneri 2a str. 301], gi\|24053109\|g... CSRA_ECOL6 - Carbon storage regulator OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=csrA PE=3... gi\|29143086, gi\|... - gi\|29143086\|ref\|NP_806428.1\| carbon storage regulator [Salmonella enterica subsp. enterica serovar T... gi\|30064056, gi\|... - gi\|30064056\|ref\|NP_838227.1\| carbon storage regulator [Shigella flexneri 2a str. 2457T], gi\|30042312... CSRA_ECO57 - Carbon storage regulator OS=Escherichia coli O157:H7 GN=csrA PE=3 SV=1 EG11447 - pleiotropic regulatory protein for carbon source metabolism / Global regulator of carbon source meta... gi\|16761602 - gi\|16761602\|ref\|NP_457219.1\| carbon storage regulator [Salmonella enterica subsp. enterica serovar T... gi\|12517135, gi\|... - gi\|15803210\|ref\|NP_289242.1\| carbon storage regulator [Escherichia coli O157:H7 EDL933], gi\|12517135... CSRA_SHIFL - Carbon storage regulator OS=Shigella flexneri GN=csrA PE=3 SV=1 CSRA_SALTY - Carbon storage regulator OS=Salmonella typhimurium GN=csrA PE=3 SV=1 CSRA_SALPB - Carbon storage regulator OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=csrA PE=3 SV=1 CSRA_SHIDS - Carbon storage regulator OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=csrA PE=3 SV=1 CSRA_SALPA - Carbon storage regulator OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=csrA PE=3 SV=1 CSRA_SHISS - Carbon storage regulator OS=Shigella sonnei (strain Ss046) GN=csrA PE=3 SV=1 gi\|188495850, gi... - gi\|75512394\|ref\|ZP_00734946.1\| COG1551: Carbon storage regulator (could also regulate swarming and q... CSRA_SALCH - Carbon storage regulator OS=Salmonella choleraesuis (strain SC-B67) GN=csrA PE=3 SV=1 CSRA_SHIBS - Carbon storage regulator OS=Shigella boydii serotype 4 (strain Sb227) GN=csrA PE=3 SV=1 gi\|194427834, gi... - gi\|75210895\|ref\|ZP_00711019.1\| COG1551: Carbon storage regulator (could also regulate swarming and q... CSRA_ECOHS - Carbon storage regulator OS=Escherichia coli O9:H4 (strain HS) GN=csrA PE=3 SV=1 CSRA_ECO24 - Carbon storage regulator OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=csrA PE=3 SV=1 gi\|194422098, gi... - gi\|83585645\|ref\|ZP_00924288.1\| COG1551: Carbon storage regulator (could also regulate swarming and q... gi\|75256896 - gi\|75256896\|ref\|ZP_00728472.1\| COG1551: Carbon storage regulator (could also regulate swarming and q... CSRA_SALTI - Carbon storage regulator OS=Salmonella typhi GN=csrA PE=3 SV=1 gi\|190908378, gi... - gi\|75241639\|ref\|ZP_00725476.1\| COG1551: Carbon storage regulator (could also regulate swarming and q... gi\|75235711, gi\|... - gi\|75235711\|ref\|ZP_00719885.1\| COG1551: Carbon storage regulator (could also regulate swarming and q... gi\|75229771, gi\|... - gi\|75229771\|ref\|ZP_00716301.1\| COG1551: Carbon storage regulator (could also regulate swarming and q... lcl\|NC_016856.1_... - [gene=csrA] [protein=carbon storage regulator] [protein_id=YP_005238922.1] [location=complement(2991... gi\|194433040, gi... - gi\|83569948\|ref\|ZP_00921396.1\| COG1551: Carbon storage regulator (could also regulate swarming and q... sp\|B7UHB4\|CSRA_ECO27 - Carbon storage regulator OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=csrA PE=3 SV=1 CSRA_ECOL6 - Carbon storage regulator OS=Escherichia coli O6 GN=csrA PE=3 SV=1 CSRA_SALCH - Carbon storage regulator OS=Salmonella choleraesuis GN=csrA PE=3 SV=1	102.0	[0..1]	[61..1]
gi\|90331476, gi\|... - gi\|90416723\|ref\|ZP_01224653.1\| carbon storage regulator [marine gamma proteobacterium HTCC2207], gi\|... gi\|90416723\|ref\|... - carbon storage regulator [marine gamma proteobacterium HTCC2207]	102.0	[0..1]	[60..1]
gi\|124509854, gi... - gi\|124546586\|ref\|ZP_01705653.1\| carbon storage regulator, CsrA [Shewanella putrefaciens 200], gi\|124... CSRA_SHESW - Carbon storage regulator homolog OS=Shewanella sp. (strain W3-18-1) GN=csrA PE=3 SV=1 CSRA_SHEPC - Carbon storage regulator homolog OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=csrA PE...	101.0	[0..1]	[60..1]
CSRA_PSYCK - Carbon storage regulator homolog OS=Psychrobacter cryohalolentis (strain K5) GN=csrA PE=3 SV=1	101.0	[0..1]	[59..1]
CSRA_SHESM - Carbon storage regulator homolog OS=Shewanella sp. (strain MR-4) GN=csrA PE=3 SV=1 CSRA_SHESR - Carbon storage regulator homolog OS=Shewanella sp. (strain MR-7) GN=csrA PE=3 SV=1 CSRA_SHEPA - Carbon storage regulator homolog OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=csrA PE=3 ... CSRA_SHEB8 - Carbon storage regulator homolog OS=Shewanella baltica (strain OS185) GN=csrA PE=3 SV=1 CSRA_SHEON - Carbon storage regulator homolog OS=Shewanella oneidensis (strain MR-1) GN=csrA PE=3 SV=1 SO3426 - carbon storage regulator CSRA_SHEB5 - Carbon storage regulator homolog OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=csrA PE=3 S... CSRA_SHEB2 - Carbon storage regulator homolog OS=Shewanella baltica (strain OS223) GN=csrA PE=3 SV=1 CSRA_SHEHH - Carbon storage regulator homolog OS=Shewanella halifaxensis (strain HAW-EB4) GN=csrA PE=3 SV=1 CSRA_SHEB9 - Carbon storage regulator homolog OS=Shewanella baltica (strain OS195) GN=csrA PE=3 SV=1 CSRA_SHESA - Carbon storage regulator homolog OS=Shewanella sp. (strain ANA-3) GN=csrA PE=3 SV=1	101.0	[0..1]	[60..1]

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Predicted Domain #1

Region A:
Residues: [1-61]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLILTRRVGE TLMIGDEVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYQR IQAEKSQPTS  60
   61 Y

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.221849
Match:	2btiA
Description:	Structure-function studies of the RmsA CsrA post-transcriptional global regulator protein family reveals a class of RNA-binding structure
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits