YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|254731334
Organism:	Brucella abortus bv. 4 str. 292
Length:	172 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|254731334.

Description	E-value	Query Range	Subject Range
gi\|15155033, gi\|... - gi\|15887506\|ref\|NP_353187.1\| 3-hydroxydecanoyl-ACP dehydratase [Agrobacterium tumefaciens str. C58],... gi\|25292023 - pir\|\|C97377 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase (beta-hydroxydecanoyl thioester de...	225.0	[0..1]	[171..15]
gi\|88859243, gi\|... - gi\|88859243\|ref\|ZP_01133883.1\| beta-hydroxydecanoyl thioester dehydrase (trans-2-decenoyl-ACP isomer...	223.0	[0..2]	[171..1]
FABA_VIBFM - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Vibrio fischeri (strain MJ11) GN=fabA PE=3 S... FABA_VIBF1 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Vibrio fischeri (strain ATCC 700601 / ES114)...	223.0	[0..1]	[171..1]
FABA_AZOVD - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Azotobacter vinelandii (strain DJ / ATCC BAA... gi\|67155915, gi\|... - gi\|67155915\|ref\|ZP_00417542.1\| Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA [Azotobacter...	223.0	[0..2]	[171..1]
FABA_PSEAE - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas aeruginosa (strain ATCC 15692 / ... FABA_PSEA8 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas aeruginosa (strain LESB58) GN=fa... gi\|126166641, gi... - gi\|84321574\|ref\|ZP_00969929.1\| COG0764: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) ... FABA_PSEAB - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) G... gi\|126193335, gi... - gi\|84328129\|ref\|ZP_00976139.1\| COG0764: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) ... FABA_PSEAE - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas aeruginosa GN=fabA PE=3 SV=1 FABA_PSEA7 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas aeruginosa (strain PA7) GN=fabA ... gi\|107101042 - gi\|107101042\|ref\|ZP_01364960.1\| hypothetical protein PaerPA_01002072 [Pseudomonas aeruginosa PACS2]	222.0	[0..2]	[171..1]
gi\|117623164, gi... - gi\|117623164\|ref\|YP_852077.1\| 3-hydroxydecanoyl-(acyl carrier protein) dehydratase [Escherichia coli...	222.0	[0..1]	[171..67]
gi\|114772410 - gi\|114772410\|ref\|ZP_01449785.1\| beta-hydroxydecanoyl thioester dehydrase (trans-2-decenoyl-ACP isome... gi\|221134516 - gi\|221134516\|ref\|ZP_03560821.1\| 3-hydroxydecanoyl-(acyl carrier protein) dehydratase [Glaciecola sp.... gi\|114772410, gi... - gi\|114772410\|ref\|ZP_01449785.1\| beta-hydroxydecanoyl thioester dehydrase (trans-2-decenoyl-ACP isome...	222.0	[0..1]	[171..1]
FABA_VIBPA - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Vibrio parahaemolyticus GN=fabA PE=3 SV=1 FABA_VIBPA - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Vibrio parahaemolyticus serotype O3:K6 (stra...	221.0	[0..1]	[171..1]
FABA_PASMU - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pasteurella multocida GN=fabA PE=3 SV=1 FABA_PASMU - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase OS=Pasteurella multocida (strain Pm70) GN=fabA ...	221.0	[0..3]	[171..8]

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Predicted Domain #1

Region A:
Residues: [1-172]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEQKSSYGY EELLACGRGE MFGPGNAQLP LPPMLMIHRI TEISETGGAF DKGYIRAEYD  60
   61 VRPDDWYFPC HFQGNPIMPG CLGLDGMWQL TGFFLGWLGE PGRGMALSTG EVKFKGMVRP 120
  121 HTKLLEYGID FKRVMRGRLV LGTADGWLKA DGELIYQATD LRVGLSKEGS AQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	56.39794
Match:	2cf2C
Description:	No description for 2cf2C was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits