YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|228946042, gi...
Organism:	Bacillus thuringiensis serovar monterrey BGSC 4AJ1
Length:	228 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|228946042, gi....

Description	E-value	Query Range	Subject Range
gi\|51976518, gi\|... - gi\|52143049\|ref\|YP_083780.1\| hypothetical protein BCZK2189 [Bacillus cereus E33L], gi\|51976518\|gb\|AA...	5.0E-78	[1..228]	[1..228]
gi\|218897373, gi... - gi\|218897373\|ref\|YP_002445784.1\| hypothetical protein BCG9842_B2936 [Bacillus cereus G9842], gi\|2185... gi\|74491625, gi\|... - gi\|75760890\|ref\|ZP_00740902.1\| Molybdenum cofactor sulphurase [Bacillus thuringiensis serovar israel... gi\|228901019, gi... - gi\|228901019\|ref\|ZP_04065230.1\| Molybdenum cofactor sulphurase [Bacillus thuringiensis IBL 4222], gi... gi\|228965396, gi... - gi\|228965396\|ref\|ZP_04126486.1\| Molybdenum cofactor sulphurase [Bacillus thuringiensis serovar sotto...	2.0E-76	[1..228]	[1..228]
gi\|30020499, gi\|... - gi\|30020499\|ref\|NP_832130.1\| putative cytoplasmic protein [Bacillus cereus ATCC 14579], gi\|29896050\|... gi\|229127806, gi... - gi\|229127806\|ref\|ZP_04256792.1\| Molybdenum cofactor sulphurase [Bacillus cereus BDRD-Cer4], gi\|22865... gi\|228673602, gi... - gi\|229109850\|ref\|ZP_04239434.1\| Molybdenum cofactor sulphurase [Bacillus cereus Rock1-15], gi\|228673...	3.0E-75	[1..228]	[1..228]
gi\|47553197, gi\|... - gi\|47570133\|ref\|ZP_00240790.1\| hypothetical protein cytosolic protein [Bacillus cereus G9241], gi\|47...	6.0E-75	[1..228]	[1..228]
gi\|42737456, gi\|... - gi\|42781533\|ref\|NP_978780.1\| hypothetical protein BCE_2471 [Bacillus cereus ATCC 10987], gi\|42737456...	4.0E-74	[1..228]	[1..228]
gi\|163940210, gi... - gi\|89209188\|ref\|ZP_01187640.1\| 3-alpha:MOSC [Bacillus weihenstephanensis KBAB4], gi\|89152887\|gb\|EAR7...	5.0E-74	[1..228]	[1..228]
gi\|46317748, gi\|... - gi\|78060932\|ref\|YP_370840.1\| MOSC family protein [Burkholderia sp. 383], gi\|77968817\|gb\|ABB10196.1\| ...	4.0E-68	[1..227]	[1..235]
gi\|17428171 - gi\|17428171\|emb\|CAD14859.1\| conserved hypothetical protein [Ralstonia solanacearum GMI1000] gi\|17545876 - gi\|17545876\|ref\|NP_519278.1\| hypothetical protein RSc1157 [Ralstonia solanacearum GMI1000]	3.0E-67	[6..227]	[8..230]
gi\|186682374, gi... - gi\|53687172\|ref\|ZP_00107531.2\| COG2258: Uncharacterized protein conserved in bacteria [Nostoc puncti...	7.0E-67	[5..216]	[1..213]
gi\|124876111, gi... - gi\|84353075\|ref\|ZP_00978012.1\| COG2258: Uncharacterized protein conserved in bacteria [Burkholderia ...	1.0E-65	[7..226]	[13..234]

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Predicted Domain #1

Region A:
Residues: [1-228]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANEYQLLSL NIGLPKEVTY GGKVIHTGIN KKQVKEPVFL SFVKFNGDGQ ADLVHHGGVD  60
   61 KAVCVYSGEH YGYWEKELNQ VLVYGAFGEN ITISGMCEED VCIGDTFQIG EAIVQVTQPR 120
  121 QPCFKLAKKY NIPKLPLYFQ ETGYTGFYFR VLKEGWVSPA DTLKLLKSDL KGVTVAFANR 180
  181 IMHKEKQNLE GVKRILEVHA LSTSWRNTFE KRMRGEEMNT KERLEGKK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	63.154902
Match:	1o65A
Description:	Crystal structure of an hypothetical protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	0.442129199706088	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: