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View Structure Prediction Details

Protein: RWA1_ARATH
Organism: Arabidopsis thaliana
Length: 540 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RWA1_ARATH.

Description E-value Query
Range
Subject
Range
gi|15983464 - gi|15983464|gb|AAL11600.1|AF424606_1 AT5g46340/MPL12_14 [Arabidopsis thaliana]
805.0 [0..1] [540..1]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDPGPITPG QVSFLLGVIP IFVGWIYSEL LEYRKSWVPL KPHSDNNLVE LGDVAEKDDD  60
   61 KADLLEGGLA RSPSVKFHNS SIRTNIIRFL S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDSFLLEHR ATLRAMSEFG AILIYFYICD RTELLGDSTK NYNRDLFLFL YVLLIIVSAM  60
   61 TSLR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [156-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KHNDKSPISG KSILYLNRHQ TEEWKGWMQV LFLMYHYFAA AEIYNAIRIF IAAYVWMTGF  60
   61 GNFSYYYVRK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [226-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DFSVARFAQM MWRLNFFVAF CCIVLNNDYM LYYICPMHTL FTLMVYGALG IFSKYNEIGS  60
   61 VMALKIFSCF LVVFLLWEIP GAFEIFWGPL TFLLGYNDPA K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [327-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDLHRLHEWH FRSGLDRYIW IIGMIYAYYH PTVERWMEKL EDCETKKRLS IKAAIVTITV  60
   61 LVGYVWYECI YKLDRTSYNM Y

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [408-540]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPYTSWIPIT VYICLRNFTH QLRSVSLTLF AWLGKITLET YISQFHIWLR SNMPDGQPKW  60
   61 LLSIIPGYPM LNFMLTTAIY VLVSHRLFEL TNTLKTVFVP TKDNKRLFSN FIAGIAIALP 120
  121 LYCFSFVLLQ IHR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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