YRC Public Data Repository - Protein Structure Prediction

Protein:	DAD2_CANGA
Organism:	Candida glabrata CBS 138
Length:	127 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAD2_CANGA.

Description	E-value	Query Range	Subject Range
gi\|38108535, gi\|... - gi\|39968859\|ref\|XP_365820.1\| hypothetical protein MGG_02522 [Magnaporthe grisea 70-15], gb\|EAA54537....	130.0	[0..3]	[120..28]
gi\|71004202, gi\|... - gi\|71004202\|ref\|XP_756767.1\| hypothetical protein UM00620.1 [Ustilago maydis 521], ref\|XP_398235.1\| ...	129.0	[0..2]	[120..36]
gi\|151941622 - gi\|151941622\|gb\|EDN59985.1\| duo1 and dam1 interacting protein [Saccharomyces cerevisiae YJM789] DAD2_YEAST - DASH complex subunit DAD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAD2 PE=1 SV=1 DAD2 - Essential subunit of the Dam1 complex (aka DASH complex), couples kinetochores to the force produced...	128.0	[0..1]	[123..1]
gi\|90302101, gi\|... - gi\|90302101\|gb\|EAS31732.1\| hypothetical protein CIMG_07211 [Coccidioides immitis RS], gi\|119184935\|r...	127.0	[0..4]	[125..36]
DAD2_KLULA - DASH complex subunit DAD2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 12... DAD2_KLULA - DASH complex subunit DAD2 OS=Kluyveromyces lactis GN=DAD2 PE=3 SV=1	127.0	[0..3]	[124..2]
DAD2_ASHGO - DASH complex subunit DAD2 OS=Ashbya gossypii GN=DAD2 PE=3 SV=1 DAD2_ASHGO - DASH complex subunit DAD2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-10...	120.0	[0..10]	[124..9]
gi\|114188929, gi... - gi\|115402013\|ref\|XP_001217083.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	120.0	[0..2]	[125..33]
gi\|85080891 - gi\|85080891\|ref\|XP_956625.1\| hypothetical protein NCU01841 [Neurospora crassa OR74A] gi\|28881231, gi\|... - gi\|32415603\|ref\|XP_328280.1\| predicted protein [Neurospora crassa], gi\|28917696\|gb\|EAA27389.1\| conse...	120.0	[0..3]	[120..22]
gi\|42545662, gi\|... - gi\|46109336\|ref\|XP_381726.1\| hypothetical protein FG01550.1 [Gibberella zeae PH-1], gi\|42545662\|gb\|E...	115.0	[0..4]	[120..28]
DAD2_DEBHA - DASH complex subunit DAD2 - Debaryomyces hansenii (Yeast) (Torulaspora hansenii) gi\|49653621, gi\|... - gi\|50418869\|ref\|XP_457955.1\| hypothetical protein DEHA0C06897g [Debaryomyces hansenii CBS767], gi\|49...	115.0	[0..4]	[123..12]

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Predicted Domain #1

Region A:
Residues: [1-127]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGLEQQKLA KQQELAALKR ITALTDQMRT ELDEMSIEVS KINKNAESVA NVMANWDSIR  60
   61 KYISEASLGL LRYAEGDYQV GAWDGKENKS DKSNADKSYQ SDDEHKTEPL PEALVRISVA 120
  121 NNEESRK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	63.568636
Match:	PF08654.1
Description:	No description for PF08654.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.950	0.005	microtubule	f.17.1	F1F0 ATP synthase subunit C

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits