YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|228987588, gi...
Organism:	Bacillus thuringiensis serovar tochigiensis BGSC 4Y1
Length:	368 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|228987588, gi....

Description	E-value	Query Range	Subject Range
gi\|228792290, gi... - gi\|228967402\|ref\|ZP_04128435.1\| hypothetical protein bthur0004_42030 [Bacillus thuringiensis serovar... gi\|228818152, gi... - gi\|228941502\|ref\|ZP_04104052.1\| hypothetical protein bthur0008_41400 [Bacillus thuringiensis serovar... gi\|228778687, gi... - gi\|228981027\|ref\|ZP_04141329.1\| hypothetical protein bthur0002_41890 [Bacillus thuringiensis Bt407],... gi\|228974432, gi... - gi\|228974432\|ref\|ZP_04135000.1\| hypothetical protein bthur0003_41860 [Bacillus thuringiensis serovar... gi\|75761260, gi\|... - gi\|75761260\|ref\|ZP_00741242.1\| GTP-binding protein [Bacillus thuringiensis serovar israelensis ATCC ... gi\|228902861, gi... - gi\|228902861\|ref\|ZP_04067004.1\| hypothetical protein bthur0014_40310 [Bacillus thuringiensis IBL 422... gi\|218541005, gi... - gi\|218899503\|ref\|YP_002447914.1\| GTPase family protein [Bacillus cereus G9842], gi\|218541005\|gb\|ACK9...	6.0E-60	[1..368]	[1..368]
gi\|163864288, gi... - gi\|89206303\|ref\|ZP_01184863.1\| GTP-binding protein, HSR1-related [Bacillus weihenstephanensis KBAB4]... gi\|228717186, gi... - gi\|229062034\|ref\|ZP_04199359.1\| hypothetical protein bcere0026_41060 [Bacillus cereus AH603], gi\|228... gi\|228747716, gi... - gi\|229013556\|ref\|ZP_04170689.1\| hypothetical protein bmyco0001_39650 [Bacillus mycoides DSM 2048], g... gi\|229169083, gi... - gi\|229169083\|ref\|ZP_04296798.1\| hypothetical protein bcere0007_40350 [Bacillus cereus AH621], gi\|228... gi\|229135161, gi... - gi\|229135161\|ref\|ZP_04263961.1\| hypothetical protein bcere0014_40630 [Bacillus cereus BDRD-ST196], g...	1.0E-59	[1..368]	[1..368]
gi\|89150625, gi\|... - gi\|89201415\|ref\|ZP_01180156.1\| GTP-binding protein, HSR1-related [Bacillus cereus subsp. cytotoxis N...	1.0E-56	[1..368]	[1..368]
gi\|68008946, gi\|... - gi\|68054540\|ref\|ZP_00538697.1\| GTP-binding protein, HSR1-related [Exiguobacterium sibiricum 255-15],...	1.0E-54	[3..368]	[8..374]
gi\|16800594 - gi\|16800594\|ref\|NP_470862.1\| GTP-binding protein YqeH [Listeria innocua Clip11262] gi\|16413999, gi\|... - pir\|\|AE1623 hypothetical protein homolog lin1526 [imported] - Listeria innocua (strain Clip11262), g...	4.0E-53	[1..368]	[1..366]
gi\|254873358 - gi\|254873358\|ref\|ZP_05246068.1\| GTP-binding protein YqeH [Listeria monocytogenes FSL N1-017] gi\|46907719, gi\|... - gi\|46907719\|ref\|YP_014108.1\| GTP-binding protein YqeH [Listeria monocytogenes str. 4b F2365], gi\|468... gi\|225876554, gi... - gi\|226224092\|ref\|YP_002758199.1\| hypothetical protein Lm4b_01501b [Listeria monocytogenes Clip81459]... gi\|153202417, gi... - gi\|254931426\|ref\|ZP_05264785.1\| GTP-binding protein YqeH [Listeria monocytogenes HPB2262], gi\|153202... gi\|217333633, gi... - gi\|217964363\|ref\|YP_002350041.1\| GTPase family protein [Listeria monocytogenes HCC23], gi\|217333633\|...	4.0E-53	[1..368]	[1..366]
gi\|89100814, gi\|... - gi\|89100814\|ref\|ZP_01173666.1\| GTP-binding protein [Bacillus sp. NRRL B-14911], gi\|89084460\|gb\|EAR63...	5.0E-53	[1..368]	[1..367]
gi\|254936493, gi... - gi\|254936493\|ref\|ZP_05268190.1\| GTP-binding protein YqeH [Listeria monocytogenes F6900], gi\|15317954... gi\|153190933, gi... - gi\|254912165\|ref\|ZP_05262177.1\| GTP-binding protein YqeH [Listeria monocytogenes J2818], gi\|15319093... gi\|47095444, gi\|... - gi\|47095444\|ref\|ZP_00233054.1\| GTPase, putative [Listeria monocytogenes str. 1/2a F6854], gi\|4701626... gi\|126943497, gi... - gi\|254898343\|ref\|ZP_05258267.1\| GTP-binding protein YqeH [Listeria monocytogenes J0161], gi\|15318384...	5.0E-53	[1..368]	[1..366]
gi\|47093412, gi\|... - gi\|47093412\|ref\|ZP_00231177.1\| GTPase, putative [Listeria monocytogenes str. 4b H7858], gi\|47018191\|...	2.0E-52	[1..368]	[6..371]
gi\|227554296, gi... - gi\|227554296\|ref\|ZP_03984343.1\| GTP-binding protein [Enterococcus faecalis HH22], gi\|227176586\|gb\|EE... gi\|29377339, gi\|... - gi\|29377339\|ref\|NP_816493.1\| GTP-binding protein YqeH [Enterococcus faecalis V583], gi\|29344806\|gb\|A...	5.0E-52	[1..368]	[1..369]

Back

Predicted Domain #1

Region A:
Residues: [1-368]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTETIKCIGC GVEIQTEDKN EVGYAPASSL EKEQVICQRC FRLKHYNEIQ DVSLTDDDFL  60
   61 RILNGIGKSD ALVVKIVDIF DFNGSWLPGL HRFVGNNKVL LVGNKADLIP KSVKHDKVKH 120
  121 WMRYSAKQLG LKPEDVFLIS AAKGQGIAEL ADAIEYYRGG KDVYVVGCTN VGKSTFINRM 180
  181 IKEFSDETEN VITTSHFPGT TLDLIDIPLD EESSLYDTPG IINHHQMAHY VGKQSLKLIT 240
  241 PTKEIKPMVF QLNEEQTLFF SGLARFDYVS GGRRAFTCHF SNRLTIHRTK LEKADELYKN 300
  301 HAGDLLSPPT PEELENMPEL VKYEFNIREP KTDVVFSGLG WVTVNEPGAK IVAHVPKGVS 360
  361 VSLRKSLI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.0
Match:	2hjgA
Description:	No description for 2hjgA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits