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View Structure Prediction Details

Protein: gi|227815860, gi...
Organism: Bacillus anthracis str. CDC 684
Length: 223 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|227815860, gi....

Description E-value Query
Range
Subject
Range
gi|42780487, gi|... - gi|42780487|ref|NP_977734.1| DNA-binding response regulator [Bacillus cereus ATCC 10987], gi|4273640...
gi|222095033, gi... - gi|222095033|ref|YP_002529093.1| response regulator [Bacillus cereus Q1], gi|221239091|gb|ACM11801.1...
gi|217068126, gi... - gi|217958874|ref|YP_002337422.1| DNA-binding response regulator [Bacillus cereus AH187], gi|21706812...
gi|206977570, gi... - gi|206977570|ref|ZP_03238464.1| DNA-binding response regulator [Bacillus cereus H3081.97], gi|206744...
1.0E-67 [1..223] [1..223]
gi|47556738, gi|... - gi|47566185|ref|ZP_00237213.1| two-component response regulator [Bacillus cereus G9241], gi|47556738...
4.0E-67 [1..223] [1..223]
gi|163939206, gi... - gi|89204474|ref|ZP_01183051.1| Response regulator receiver:Transcriptional regulatory protein, C-ter...
4.0E-67 [1..223] [1..223]
gi|49477181, gi|... - gi|49477181|ref|YP_035526.1| response regulator [Bacillus thuringiensis serovar konkukian str. 97-27...
6.0E-67 [1..223] [1..223]
gi|225785753, gi... - gi|225863261|ref|YP_002748639.1| DNA-binding response regulator [Bacillus cereus 03BB102], gi|225785...
gi|52144036, gi|... - gi|52144036|ref|YP_082792.1| response regulator [Bacillus cereus E33L], gi|51977505|gb|AAU19055.1| r...
gi|118416098, gi... - gi|118476873|ref|YP_894024.1| response regulator [Bacillus thuringiensis str. Al Hakam], gi|11841609...
gi|218902506, gi... - gi|218902506|ref|YP_002450340.1| DNA-binding response regulator [Bacillus cereus AH820], gi|21853851...
gi|254726203 - gi|254726203|ref|ZP_05187985.1| DNA-binding response regulator [Bacillus anthracis str. A1055]
gi|196022663, gi... - gi|196046479|ref|ZP_03113704.1| DNA-binding response regulator [Bacillus cereus 03BB108], gi|1960226...
gi|196040638, gi... - gi|196040638|ref|ZP_03107937.1| DNA-binding response regulator [Bacillus cereus NVH0597-99], gi|1960...
gi|195992031, gi... - gi|196035354|ref|ZP_03102759.1| DNA-binding response regulator [Bacillus cereus W], gi|195992031|gb|...
6.0E-67 [1..223] [1..223]
gi|29894995, gi|... - gi|30019451|ref|NP_831082.1| two-component response regulator [Bacillus cereus ATCC 14579], gi|29894...
gi|218164030, gi... - gi|218236073|ref|YP_002366082.1| DNA-binding response regulator [Bacillus cereus B4264], gi|21816403...
1.0E-66 [1..223] [1..223]
gi|152023577, gi... - gi|89200931|ref|ZP_01179680.1| Response regulator receiver:Transcriptional regulatory protein, C-ter...
5.0E-65 [1..223] [1..223]
gi|98660596 - gi|98660596|dbj|GAA02177.1| unnamed protein product [Pelotomaculum thermopropionicum SI]
4.0E-64 [1..223] [3..228]
gi|82402957, gi|... - gi|82499061|ref|ZP_00884513.1| Response regulator receiver [Caldicellulosiruptor saccharolyticus DSM...
1.0E-63 [4..223] [1..223]
gi|83588943, gi|... - gi|83588943|ref|YP_428952.1| two component transcriptional regulator [Moorella thermoacetica ATCC 39...
6.0E-63 [4..221] [5..227]

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Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKYRVLVVD DESDMRQLVG MYLDNFGYEW GEAENGKEAL KKLETDHYDF VVLDIMMPEM  60
   61 DGLSVCKEIR KTSDVPIIFL TAKGEEWNRV NGLRMGADDY IVKPFSPGEL IARMEAVLRR 120
  121 YTKQEQQEEI QFGPILINEK SRKIEADGEP ISLTVKEFDL LYFLCQHTGQ VFSREQLLEK 180
  181 VWGYDYAGST RTVDTHVKTM RLKLGEGGNY IQTVWGVGYK FEV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.09691
Match: 2oqrA
Description: No description for 2oqrA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle