YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|228935657, gi...
Organism:	Bacillus thuringiensis serovar andalousiensis BGSC 4AW1
Length:	170 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|228935657, gi....

Description	E-value	Query Range	Subject Range
gi\|228772130, gi... - gi\|228987589\|ref\|ZP_04147705.1\| hypothetical protein bthur0001_42590 [Bacillus thuringiensis serovar... gi\|47569332, gi\|... - gi\|47569332\|ref\|ZP_00240016.1\| HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 [Bacillus cer... gi\|228625511, gi... - gi\|229157951\|ref\|ZP_04286023.1\| hypothetical protein bcere0010_41310 [Bacillus cereus ATCC 4342], gi...	9.0E-34	[1..170]	[1..170]
gi\|89201414, gi\|... - gi\|89201414\|ref\|ZP_01180155.1\| HAD-superfamily hydrolase subfamily IIIA:HAD-superfamily phosphatase ...	9.0E-34	[1..170]	[1..170]
gi\|25356478 - pir\|\|B83815 hypothetical protein BH1322 [imported] - Bacillus halodurans (strain C-125) gi\|10173938, gi\|... - gi\|15613885\|ref\|NP_242188.1\| hypothetical protein BH1322 [Bacillus halodurans C-125], gi\|10173938\|db...	2.0E-33	[1..170]	[2..171]
gi\|42783463, gi\|... - gi\|42783463\|ref\|NP_980710.1\| HAD superfamily hydrolase [Bacillus cereus ATCC 10987], gi\|42739392\|gb\|...	2.0E-33	[1..170]	[1..170]
gi\|218161415, gi... - gi\|218233458\|ref\|YP_002369146.1\| hydrolase, HAD subfamily IIIA [Bacillus cereus B4264], gi\|218161415... gi\|206735462, gi... - gi\|206969774\|ref\|ZP_03230728.1\| hydrolase, HAD subfamily IIIA [Bacillus cereus AH1134], gi\|206735462... gi\|228723287, gi... - gi\|229048043\|ref\|ZP_04193618.1\| hypothetical protein bcere0027_40170 [Bacillus cereus AH676], gi\|228... gi\|228799085, gi... - gi\|228960606\|ref\|ZP_04122253.1\| hypothetical protein bthur0005_40700 [Bacillus thuringiensis serovar... gi\|29897972, gi\|... - gi\|30022414\|ref\|NP_834045.1\| putative lipase [Bacillus cereus ATCC 14579], gi\|29897972\|gb\|AAP11246.1... gi\|228954623, gi... - gi\|228954623\|ref\|ZP_04116647.1\| hypothetical protein bthur0006_39920 [Bacillus thuringiensis serovar... gi\|228836587, gi... - gi\|228923089\|ref\|ZP_04086381.1\| hypothetical protein bthur0011_40690 [Bacillus thuringiensis serovar... gi\|228653734, gi... - gi\|229129617\|ref\|ZP_04258585.1\| hypothetical protein bcere0015_40590 [Bacillus cereus BDRD-Cer4], gi... gi\|228671566, gi... - gi\|229111810\|ref\|ZP_04241356.1\| hypothetical protein bcere0018_40540 [Bacillus cereus Rock1-15], gi\|... gi\|229081600, gi... - gi\|229081600\|ref\|ZP_04214096.1\| hypothetical protein bcere0023_42310 [Bacillus cereus Rock4-2], gi\|2... gi\|229071843, gi... - gi\|229071843\|ref\|ZP_04205056.1\| hypothetical protein bcere0025_40120 [Bacillus cereus F65185], gi\|22... gi\|229192549, gi... - gi\|229192549\|ref\|ZP_04319510.1\| hypothetical protein bcere0002_42000 [Bacillus cereus ATCC 10876], g... gi\|228602857, gi... - gi\|229180614\|ref\|ZP_04307955.1\| hypothetical protein bcere0005_39580 [Bacillus cereus 172560W], gi\|2... gi\|228630906, gi... - gi\|229152540\|ref\|ZP_04280730.1\| hypothetical protein bcere0011_40760 [Bacillus cereus m1550], gi\|228... gi\|229146908, gi... - gi\|229146908\|ref\|ZP_04275272.1\| hypothetical protein bcere0012_40470 [Bacillus cereus BDRD-ST24], gi...	6.0E-33	[1..170]	[1..170]
gi\|52786496, gi\|... - gi\|52786496\|ref\|YP_092325.1\| YqeG [Bacillus licheniformis ATCC 14580], gi\|52348998\|gb\|AAU41632.1\| Yq...	2.0E-32	[2..170]	[4..172]
YQEG_BACSU - Uncharacterized protein yqeG OS=Bacillus subtilis GN=yqeG PE=4 SV=1 gi\|221319739 - gi\|221319739\|ref\|ZP_03601033.1\| hypothetical protein BsubsJ_13878 [Bacillus subtilis subsp. subtilis... gi\|221314817 - gi\|221314817\|ref\|ZP_03596622.1\| hypothetical protein BsubsN3_13952 [Bacillus subtilis subsp. subtili... YQEG_BACSU - Uncharacterized protein YqeG OS=Bacillus subtilis (strain 168) GN=yqeG PE=4 SV=1 gi\|221324017 - gi\|221324017\|ref\|ZP_03605311.1\| hypothetical protein BsubsS_14007 [Bacillus subtilis subsp. subtilis...	2.0E-32	[2..170]	[4..172]
gi\|228717187, gi... - gi\|229062035\|ref\|ZP_04199360.1\| hypothetical protein bcere0026_41070 [Bacillus cereus AH603], gi\|228... gi\|228747717, gi... - gi\|229013557\|ref\|ZP_04170690.1\| hypothetical protein bmyco0001_39660 [Bacillus mycoides DSM 2048], g... gi\|229169084, gi... - gi\|229169084\|ref\|ZP_04296799.1\| hypothetical protein bcere0007_40360 [Bacillus cereus AH621], gi\|228... gi\|163864289, gi... - gi\|89206304\|ref\|ZP_01184864.1\| HAD-superfamily hydrolase subfamily IIIA:HAD-superfamily phosphatase ... gi\|229135162, gi... - gi\|229135162\|ref\|ZP_04263962.1\| hypothetical protein bcere0014_40640 [Bacillus cereus BDRD-ST196], g...	4.0E-32	[1..170]	[1..170]
gi\|27468202, gi\|... - gi\|27468202\|ref\|NP_764839.1\| hypothetical protein SE1284 [Staphylococcus epidermidis ATCC 12228], gi... gi\|57637726, gi\|... - gi\|57867068\|ref\|YP_188741.1\| HAD superfamily hydrolase [Staphylococcus epidermidis RP62A], gi\|576377... gi\|251811014, gi... - gi\|251811014\|ref\|ZP_04825487.1\| HAD superfamily hydrolase [Staphylococcus epidermidis BCM-HMP0060], ...	5.0E-32	[2..170]	[6..174]
gi\|89100815, gi\|... - gi\|89100815\|ref\|ZP_01173667.1\| hypothetical protein B14911_06713 [Bacillus sp. NRRL B-14911], gi\|890...	7.0E-32	[1..170]	[11..180]

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Predicted Domain #1

Region A:
Residues: [1-170]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFLPNEYV KNVYHVQPED LKKRGIKGVI TDLDNTLIEW DRPNATPQLE EWFLKMKEQG  60
   61 IQVTVVSNNN EQRVKDFADP LGIPFIHSAR KPFVRAFKRA IREMQLQPDE VVVIGDQLLT 120
  121 DVLGGNRVGL HTILVVPVAQ TDGLVTRFNR KIERRIMRNM KKKGLINWEE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	22.522879
Match:	2b8eA
Description:	CopA ATP Binding Domain
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits