YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|254755808
Organism:	Bacillus anthracis str. Vollum
Length:	535 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|254755808.

Description	E-value	Query Range	Subject Range
PYRG_GEOKA - CTP synthase OS=Geobacillus kaustophilus GN=pyrG PE=3 SV=1 PYRG_GEOKA - CTP synthase OS=Geobacillus kaustophilus (strain HTA426) GN=pyrG PE=3 SV=1	0.0	[1..530]	[1..530]
PYRG_CARHZ - CTP synthase OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) GN=pyrG ...	0.0	[1..533]	[1..533]
PYRG_BACLD - CTP synthase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9...	0.0	[1..534]	[1..534]
PYRG_BACCN - CTP synthase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98) GN=pyrG P...	0.0	[1..535]	[1..535]
gi\|229158899, gi... - gi\|229158899\|ref\|ZP_04286956.1\| CTP synthase [Bacillus cereus ATCC 4342], gi\|228624510\|gb\|EEK81280.1... gi\|228658633, gi... - gi\|229124842\|ref\|ZP_04254020.1\| CTP synthase [Bacillus cereus 95/8201], gi\|228658633\|gb\|EEL14295.1\| ... gi\|228988565, gi... - gi\|228988565\|ref\|ZP_04148652.1\| CTP synthase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1],... PYRG_BACC0 - CTP synthase OS=Bacillus cereus (strain AH820) GN=pyrG PE=3 SV=1 gi\|228930347, gi... - gi\|228930347\|ref\|ZP_04093351.1\| CTP synthase [Bacillus thuringiensis serovar pondicheriensis BGSC 4B... PYRG_BACCZ - CTP synthase OS=Bacillus cereus (strain ZK / E33L) GN=pyrG PE=3 SV=1	0.0	[1..535]	[1..535]
gi\|195990880, gi... - gi\|196036547\|ref\|ZP_03103942.1\| CTP synthase [Bacillus cereus W], gi\|195990880\|gb\|EDX54853.1\| CTP sy... PYRG_BACHK - CTP synthase OS=Bacillus thuringiensis subsp. konkukian GN=pyrG PE=3 SV=1 gi\|229187564, gi... - gi\|229187564\|ref\|ZP_04314704.1\| CTP synthase [Bacillus cereus BGSC 6E1], gi\|228595931\|gb\|EEK53611.1\|... PYRG_BACAH - CTP synthase OS=Bacillus thuringiensis (strain Al Hakam) GN=pyrG PE=3 SV=1 gi\|228810632, gi... - gi\|228949059\|ref\|ZP_04111331.1\| CTP synthase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1], g... PYRG_BACC3 - CTP synthase OS=Bacillus cereus (strain 03BB102) GN=pyrG PE=3 SV=1 PYRG_BACHK - CTP synthase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=pyrG PE=3 SV=1 gi\|196023776, gi... - gi\|196045569\|ref\|ZP_03112800.1\| CTP synthase [Bacillus cereus 03BB108], gi\|196023776\|gb\|EDX62452.1\| ... gi\|196040969, gi... - gi\|196040969\|ref\|ZP_03108266.1\| CTP synthase [Bacillus cereus NVH0597-99], gi\|196028137\|gb\|EDX66747....	0.0	[1..535]	[1..535]
PYRG_BACC1 - CTP synthase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=pyrG PE=3 SV=1	0.0	[1..535]	[1..535]
gi\|47553559, gi\|... - gi\|47569763\|ref\|ZP_00240435.1\| CTP synthase [Bacillus cereus G9241], gi\|47553559\|gb\|EAL11938.1\| CTP ...	0.0	[1..535]	[1..535]
PYRG_BACCR - CTP synthase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / N... gi\|229130587, gi... - gi\|229130587\|ref\|ZP_04259543.1\| CTP synthase [Bacillus cereus BDRD-Cer4], gi\|228652926\|gb\|EEL08808.1... gi\|229147878, gi... - gi\|229147878\|ref\|ZP_04276219.1\| CTP synthase [Bacillus cereus BDRD-ST24], gi\|228635528\|gb\|EEK92017.1... gi\|228700984, gi... - gi\|229082552\|ref\|ZP_04215015.1\| CTP synthase [Bacillus cereus Rock4-2], gi\|228700984\|gb\|EEL53507.1\| ... gi\|228670732, gi... - gi\|229112751\|ref\|ZP_04242284.1\| CTP synthase [Bacillus cereus Rock1-15], gi\|228670732\|gb\|EEL26043.1\|... gi\|206970010, gi... - gi\|206970010\|ref\|ZP_03230963.1\| CTP synthase [Bacillus cereus AH1134], gi\|206734587\|gb\|EDZ51756.1\| C... gi\|229153501, gi... - gi\|229153501\|ref\|ZP_04281679.1\| CTP synthase [Bacillus cereus m1550], gi\|228630105\|gb\|EEK86756.1\| CT... gi\|229181587, gi... - gi\|229181587\|ref\|ZP_04308912.1\| CTP synthase [Bacillus cereus 172560W], gi\|228601783\|gb\|EEK59279.1\| ... gi\|228722318, gi... - gi\|229051009\|ref\|ZP_04194557.1\| CTP synthase [Bacillus cereus AH676], gi\|228722318\|gb\|EEL73715.1\| CT... gi\|228710296, gi... - gi\|229072805\|ref\|ZP_04206004.1\| CTP synthase [Bacillus cereus F65185], gi\|228710296\|gb\|EEL62271.1\| C... gi\|228835564, gi... - gi\|228924074\|ref\|ZP_04087350.1\| CTP synthase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1... gi\|228961602, gi... - gi\|228961602\|ref\|ZP_04123211.1\| CTP synthase [Bacillus thuringiensis serovar pakistani str. T13001],...	0.0	[1..535]	[1..535]
gi\|146297554, gi... - gi\|82499007\|ref\|ZP_00884460.1\| CTP synthase [Caldicellulosiruptor saccharolyticus DSM 8903], gi\|8240...	0.0	[3..535]	[6..538]

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Predicted Domain #1

Region A:
Residues: [1-535]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKYIFVTGG VVSSLGKGIT AASLGRLLKN RGLNVTIQKF DPYINVDPGT MSPYQHGEVF  60
   61 VTDDGAETDL DLGHYERFID INLNKYSNVT TGKIYSSVLQ KERRGEYLGG TVQVIPHITN 120
  121 EIKERVYRSG RETNADVVIT EIGGTVGDIE SLPFLEAIRQ IKSDIGRDNV MYIHCTLIPY 180
  181 LKAAGEMKTK PTQHSVKELR SLGIQPNIIV VRTEMPVSQD MKDKLALFCD IDTKAVIEAR 240
  241 DADTLYAVPL SLQEQNMDQI VCDHLKLDNP AADMTEWTAL VEKVRNLSKK TKIALVGKYV 300
  301 ELQDAYISVV EALRHAGYSF DTDVEVKWVN AEHVTAENVQ ELVGDTDGIL VPGGFGDRGV 360
  361 EGKIVAIQYA RENKVPFLGI CLGMQLASIE FARNVLGLEG ANSSEINPDT PYAIIDLLPE 420
  421 QKDVEDLGGT LRLGLYPCKL SEETNAYNAY NEPVVYERHR HRYEFNNQFR PDMEKAGFVF 480
  481 SGTSPDGRLV EIIELKDHPW FVAAQFHPEL VSRPNRPQPL FHDFVKASLT NKESK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	1000.0
Match:	1s1mA
Description:	Crystal Structure of E. Coli CTP Synthetase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits