YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|254752412
Organism:	Bacillus anthracis str. Vollum
Length:	215 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|254752412.

Description	E-value	Query Range	Subject Range
PCP_BACC1 - Pyrrolidone-carboxylate peptidase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=pcp PE=3 SV=1	2.0E-84	[1..215]	[1..215]
PCP_BACHK - Pyrrolidone-carboxylate peptidase OS=Bacillus thuringiensis subsp. konkukian GN=pcp PE=3 SV=1 PCP_BACHK - Pyrrolidone-carboxylate peptidase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=pcp P...	2.0E-84	[1..215]	[1..215]
PCP_BACWK - Pyrrolidone-carboxylate peptidase OS=Bacillus weihenstephanensis (strain KBAB4) GN=pcp PE=3 SV=1	8.0E-84	[1..215]	[1..215]
gi\|47558371, gi\|... - gi\|47564219\|ref\|ZP_00235264.1\| pyrrolidone-carboxylate peptidase [Bacillus cereus G9241], gi\|4755837...	1.0E-83	[1..215]	[1..215]
gi\|229128401, gi... - gi\|229128401\|ref\|ZP_04257382.1\| Pyrrolidone-carboxylate peptidase [Bacillus cereus BDRD-Cer4], gi\|22... PCP_BACCR - Pyrrolidone-carboxylate peptidase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 1...	4.0E-83	[1..215]	[1..215]
PCP_BACCZ - Pyrrolidone-carboxylate peptidase OS=Bacillus cereus (strain ZK / E33L) GN=pcp PE=3 SV=1	6.0E-83	[1..215]	[1..215]
gi\|238712781, gi... - gi\|77956259\|ref\|ZP_00820376.1\| COG2039: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl p...	7.0E-82	[1..215]	[1..215]
gi\|77978036 - gi\|77978036\|ref\|ZP_00833471.1\| COG2039: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl p...	1.0E-81	[1..215]	[1..215]
gi\|167398887, gi... - gi\|167398887\|ref\|ZP_02304411.1\| pyroglutamyl-peptidase I [Yersinia pestis biovar Antiqua str. UG05-0... gi\|167421403, gi... - gi\|167421403\|ref\|ZP_02313156.1\| pyroglutamyl-peptidase I [Yersinia pestis biovar Orientalis str. MG0... gi\|149291818, gi... - gi\|149365405\|ref\|ZP_01887440.1\| putative pyrrolidone-carboxylate peptidase [Yersinia pestis CA88-412... gi\|167057709, gi... - gi\|167423539\|ref\|ZP_02315292.1\| pyroglutamyl-peptidase I [Yersinia pestis biovar Mediaevalis str. K1... PCP_YERPG - Pyrrolidone-carboxylate peptidase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=pcp PE=3 SV=1 gi\|167469006 - gi\|167469006\|ref\|ZP_02333710.1\| pyroglutamyl-peptidase I [Yersinia pestis FV-1] PCP_YERPB - Pyrrolidone-carboxylate peptidase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=pcp P... PCP_YERPP - Pyrrolidone-carboxylate peptidase OS=Yersinia pestis (strain Pestoides F) GN=pcp PE=3 SV=1 gi\|229688376, gi... - gi\|229898828\|ref\|ZP_04513973.1\| putative pyrrolidone-carboxylate peptidase [Yersinia pestis biovar O... gi\|229701347, gi... - gi\|229895541\|ref\|ZP_04510712.1\| putative pyrrolidone-carboxylate peptidase [Yersinia pestis Pestoide... gi\|229694630, gi... - gi\|229838264\|ref\|ZP_04458423.1\| putative pyrrolidone-carboxylate peptidase [Yersinia pestis biovar O... gi\|165922848, gi... - gi\|165925241\|ref\|ZP_02221073.1\| pyroglutamyl-peptidase I [Yersinia pestis biovar Orientalis str. F19... PCP_YERPS - Pyrrolidone-carboxylate peptidase OS=Yersinia pseudotuberculosis GN=pcp PE=3 SV=1 gi\|166008301, gi... - gi\|166008301\|ref\|ZP_02229199.1\| pyroglutamyl-peptidase I [Yersinia pestis biovar Antiqua str. E19790... gi\|166206246, gi... - gi\|166212315\|ref\|ZP_02238350.1\| pyroglutamyl-peptidase I [Yersinia pestis biovar Antiqua str. B42003... gi\|45437153, gi\|... - gi\|45442289\|ref\|NP_993828.1\| pyrrolidone-carboxylate peptidase [Yersinia pestis biovar Microtus str.... gi\|21958043, gi\|... - gi\|22125180\|ref\|NP_668603.1\| pyrrolidone-carboxylate peptidase [Yersinia pestis KIM], gi\|21958043\|gb... gi\|15980681, gi\|... - gi\|218929775\|ref\|YP_002347650.1\| pyrrolidone-carboxylate peptidase [Yersinia pestis CO92], gi\|161229... PCP_YERPA - Pyrrolidone-carboxylate peptidase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=pcp PE=3 SV=1 PCP_YERPS - Pyrrolidone-carboxylate peptidase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=pcp ... PCP_YERPN - Pyrrolidone-carboxylate peptidase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=pcp PE=3 SV=1 PCP_YERPE - Pyrrolidone-carboxylate peptidase OS=Yersinia pestis GN=pcp PE=3 SV=1 gi\|165937078, gi... - gi\|89104172\|ref\|ZP_01176723.1\| COG2039: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl p...	1.0E-81	[1..215]	[1..215]
PCP_BACCN - Pyrrolidone-carboxylate peptidase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / ...	1.0E-81	[1..215]	[1..215]

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Predicted Domain #1

Region A:
Residues: [1-215]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVLLTGFD PFGGESINPA WEVAKSLHEK TIGEYKIISK QVPTVFHKSI SVLKEYIEEL  60
   61 APEFIICIGQ AGGRPDITIE RVAINIDDAR IADNEGNQPV DVPVVEEGPA AYWSTLPMKA 120
  121 IVKKLQEEGI PASVSQTAGT FVCNHLFYGL MHELEKHDTK MKGGFIHIPF LPEQASNYPG 180
  181 QPSMSLSTIR KGIELAVEVT TTVEVDIVEV GGTTH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	77.522879
Match:	1augA
Description:	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits