YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|254739442
Organism:	Bacillus anthracis str. Kruger B
Length:	205 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|254739442.

Description	E-value	Query Range	Subject Range
gi\|42737104, gi\|... - gi\|42781182\|ref\|NP_978429.1\| mutT/nudix family protein [Bacillus cereus ATCC 10987], gi\|42737104\|gb\|...	3.0E-49	[1..205]	[1..205]
gi\|228593282, gi... - gi\|229190165\|ref\|ZP_04317168.1\| MutT/nudix [Bacillus cereus ATCC 10876], gi\|228593282\|gb\|EEK51098.1\|... gi\|229144676, gi... - gi\|229144676\|ref\|ZP_04273077.1\| MutT/nudix [Bacillus cereus BDRD-ST24], gi\|228638808\|gb\|EEK95237.1\| ... gi\|30020169, gi\|... - gi\|30020169\|ref\|NP_831800.1\| phosphohydrolase (MutT/nudix family protein) [Bacillus cereus ATCC 1457... gi\|229127468, gi... - gi\|229127468\|ref\|ZP_04256461.1\| MutT/nudix [Bacillus cereus BDRD-Cer4], gi\|228656009\|gb\|EEL11854.1\| ... gi\|228807230, gi... - gi\|228952444\|ref\|ZP_04114526.1\| MutT/nudix [Bacillus thuringiensis serovar kurstaki str. T03a001], g... gi\|206972166, gi... - gi\|206972166\|ref\|ZP_03233114.1\| mutT/nudix family protein [Bacillus cereus AH1134], gi\|206733089\|gb\|...	6.0E-49	[1..205]	[1..205]
gi\|47566814, gi\|... - gi\|47566814\|ref\|ZP_00237532.1\| MutT/nudix family protein [Bacillus cereus G9241], gi\|47556443\|gb\|EAL...	6.0E-49	[1..205]	[1..205]
gi\|49481573, gi\|... - gi\|49481573\|ref\|YP_036194.1\| MutT/NUDIX family hydrolase [Bacillus thuringiensis serovar konkukian s...	1.0E-48	[1..205]	[1..205]
gi\|218897038, gi... - gi\|218897038\|ref\|YP_002445449.1\| mutT/nudix family protein [Bacillus cereus G9842], gi\|218540757\|gb\|... gi\|228859001, gi... - gi\|228900656\|ref\|ZP_04064876.1\| MutT/nudix [Bacillus thuringiensis IBL 4222], gi\|228859001\|gb\|EEN034... gi\|228965054, gi... - gi\|228965054\|ref\|ZP_04126151.1\| MutT/nudix [Bacillus thuringiensis serovar sotto str. T04001], gi\|22... gi\|74490847, gi\|... - gi\|75761662\|ref\|ZP_00741609.1\| Phosphohydrolase (MutT/nudix family protein) [Bacillus thuringiensis ...	4.0E-48	[1..205]	[1..205]
gi\|52143382, gi\|... - gi\|52143382\|ref\|YP_083447.1\| MutT/NUDIX family hydrolase [Bacillus cereus E33L], gi\|51976851\|gb\|AAU1...	8.0E-48	[1..205]	[1..205]
gi\|89153276, gi\|... - gi\|89208807\|ref\|ZP_01187293.1\| NUDIX hydrolase [Bacillus weihenstephanensis KBAB4], gi\|89153276\|gb\|E...	9.0E-48	[1..205]	[1..205]
gi\|41583437, gi\|... - gi\|42519150\|ref\|NP_965080.1\| hypothetical protein LJ1225 [Lactobacillus johnsonii NCC 533], gi\|41583...	7.0E-47	[1..205]	[1..204]
gi\|89202787, gi\|... - gi\|89202787\|ref\|ZP_01181498.1\| NUDIX hydrolase [Bacillus cereus subsp. cytotoxis NVH 391-98], gi\|891...	1.0E-44	[1..205]	[1..205]
gi\|62515780, gi\|... - gi\|62515780\|ref\|ZP_00387165.1\| COG1051: ADP-ribose pyrophosphatase [Lactobacillus delbrueckii subsp....	3.0E-44	[3..205]	[6..207]

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Predicted Domain #1

Region A:
Residues: [1-205]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVKWIDWVK QIQSIAQAGL TYSKDVYDIE RFQQLRDISI SMMSHYTKTD WEVVEKLFAS  60
   61 ETGYQTPKVD IRAVVFQNER LLFVKEKSDG KWALPGGWAD IGYTPTEVAA KEVLEETGFE 120
  121 VEDFKLFAIF DKEKHQPSPS ATHVYKIFIG CKIIGGEKKT SIETEDVEFF GENELPNLSI 180
  181 ARNTEEQIKE MFAYMKEPQK ETLID

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	18.30103
Match:	1vk6A
Description:	Crystal structure of NADH pyrophosphatase (1790429) from Escherichia coli k12 at 2.20 A resolution
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits