| Protein: | gi|55728049 |
| Organism: | Pongo pygmaeus |
| Length: | 725 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|55728049.
| Description | E-value | Query Range |
Subject Range |
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1122.0 | [0..1] | [725..81] |
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1109.0 | [0..1] | [725..1] |
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1109.0 | [0..1] | [725..1] |
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1108.0 | [0..1] | [725..1] |
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1103.0 | [0..1] | [725..1] |
|
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1092.0 | [0..1] | [725..1] |
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1090.0 | [0..1] | [725..1] |
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1019.0 | [0..1] | [725..1] |
|
Region A: Residues: [1-223] |
1 11 21 31 41 51
| | | | | |
1 MVMKASVDDD DSGWELSMPE KMEKSNTNWV DITQDFEEAC RELKLGELLH DKLFGLFEAM 60
61 SAIEMMDPKM DAGMIGNQVN RKVLNFEQAI KDGTIKIKDL TLPELIGIMD TCFCCLITWL 120
121 EGHSLAQTVF TCLYIHNPDF IEDPAMKAFA LGILKICDIA REKVNKAAVF EEEDFQSMTY 180
181 GFKMANSVTD LRVTGMLKDV EDDMQRRVKS TRSRQGEERD PEV
|
| Detection Method: |  |
| Confidence: | 54.455932 |
| Match: | PF04112.3 |
| Description: | No description for PF04112.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [224-406] |
1 11 21 31 41 51
| | | | | |
1 ELEHQQCLAV FSRVKFTRVL LTVLIAFTKK ETSAVAEAQK LMVQAADLLS AIHNSLHHGI 60
61 QAQNDTTKGD HPIMMGFEPL VNQRLLPPTF PRYAKIIKRE EMVNYFARLI DRIKTVCEVV 120
121 NLTNLHCILD FFCEFSEQSP CVLSRSLLQT TFLVDNKKVF GTHLMQDMVK DALRSFVSPP 180
181 VLS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [407-518] |
1 11 21 31 41 51
| | | | | |
1 PKCYLYNNHQ AKDCIDSFVT HCVRPFCSLI QIHGHNRARQ RDKLGHILEE FATLQDEAEK 60
61 VDAALHTMLL KQEPQRQHLA CLGTWVLYHN LRIMIQYLLS GFELELYSMH EY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.962 | a.7.1 | Spectrin repeat |
| View | Download | 0.961 | a.7.1 | Spectrin repeat |
| View | Download | 0.936 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.934 | f.57.1 | Description not found. |
| View | Download | 0.925 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.912 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.893 | a.47.2 | t-snare proteins |
| View | Download | 0.892 | a.19.1 | Fertilization protein |
| View | Download | 0.873 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.844 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.805 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.664 | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.640 | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.613 | a.7.8 | GAT domain |
| View | Download | 0.597 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
|
Region A: Residues: [519-725] |
1 11 21 31 41 51
| | | | | |
1 YYIYWYLSEF LYAWLMSTLS RADGSQMAEE RIMEEQQKGR SSKKTKKKKK VRPLSREITM 60
61 SQAYQNMCAG MFKTMVAFDM DGKVRKPKFE LDSEQVRYEH RFAPFNSVMT PPPVHYLQFK 120
121 EMSDLNKYSP PPQSPELYVA ASKHFQQAKM ILENIPNPDH EVNRILKVAK PNFVVMKLLA 180
181 GGHKKESKVP PEFDFSAHKY FPVVKLV
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
