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View Structure Prediction Details

Protein: gi|443013, gi|22...
Organism: Homo sapiens
Length: 100 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|443013, gi|22....

Description E-value Query
Range		 Subject
Range
gi|9844612 - gi|9844612|emb|CAC03990.1| MHC class I antigen [Microcebus murinus]
 146.0 [0..1] [98..173]
gi|46947407 - gi|46947407|gb|AAT06794.1| MHC class I antigen precursor [Mus musculus]
 143.0 [0..1] [98..192]
gi|56112035 - gi|56112035|gb|AAV71051.1| MHC class I antigen [Aotus nancymaae]
 142.0 [0..2] [99..197]
gi|19387298 - gi|19387298|gb|AAL87200.1|AF480859_1 MHC class I H-2Dr-like protein [Sigmodon hispidus]
 142.0 [0..1] [98..204]
gi|18652148 - gi|18652148|gb|AAL76977.1|AF464039_1 MHC class I antigen [Sus scrofa]
 141.0 [0..2] [98..205]
gi|46408863 - gi|46408863|emb|CAD89621.1| MHC class I antigen [Macaca mulatta]
 141.0 [0..1] [99..193]

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Predicted Domain #1
Region A:
Residues: [1-100] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQRTPKIQV YSRHPAENGK SNFLNCYVSG FHPSDIEVDL LKNGERIEKV EHSDLSFSKD  60
   61 WSFYLLYYTE FTPTEKDEYA CRVNHVTLSQ PKIVKWDRDM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.39794
Match: 1py4A
Description: Beta2 microglobulin mutant H31Y displays hints for amyloid formations
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.483195558859675 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle