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View Structure Prediction Details

Protein: ORC3_ARATH
Organism: Arabidopsis thaliana
Length: 734 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ORC3_ARATH.

Description E-value Query
Range
Subject
Range
gi|7512707, gi|5... - pir||T12452 hypothetical protein DKFZp564A0723.1 - human, gi|5262545|emb|CAB45715.1| hypothetical p...
gi|190690919 - gi|190690919|gb|ACE87234.1| origin recognition complex, subunit 3-like (yeast) protein [synthetic co...
620.0 [0..39] [734..1]
gi|114608418 - gi|114608418|ref|XP_518631.2| PREDICTED: origin recognition complex, subunit 3 isoform 9 [Pan troglo...
616.0 [0..39] [734..1]
gi|73973442 - gi|73973442|ref|XP_853756.1| PREDICTED: similar to origin recognition complex, subunit 3 isoform 1 i...
608.0 [0..39] [734..1]
ORC3_SPECI - Origin recognition complex subunit 3 OS=Spermophilus citellus GN=ORC3 PE=2 SV=1
606.0 [0..39] [734..1]
ORC3_RAT - Origin recognition complex subunit 3 OS=Rattus norvegicus GN=Orc3 PE=2 SV=1
601.0 [0..39] [734..1]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSGTVADP PQCSTTDSFN SSDTAENDIR PFFVLHKASS GNHNGKLTGI VKSKRRIESP  60
   61 SPKIAKRSEV ESVEEEDGQF FSTLRFKVFE TVWSKIEKTI EDVLRNSNSK VFSGIHDWIR 120
  121 ESFESIISSG ALKLSEAVRS YPVLTQASSK QLLTAMVLTR NLEMVDDLLT FEELELHLKS 180
  181 QGCHVAKLSS MDFSAKSGVG GCLRGLLRQF 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [211-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VMPTVDVADV TILASWYREN KNHENPVVII VDDTERCCGP VLSDLILILS EWAIKVPIFL  60
   61 IMGVSTAHDA PRKILSVNAL QRLCATRFT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [300-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSSPAERMDA VLKAVFLKPC SGFTVSHKVA LFMRSYFLCQ DGTLTSFVRT LKIACLQHFS  60
   61 LEPLSIMLEH FCHDGVNQLS GEGTELLTEA TMKHAFDLPS VTRNKITRS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [409-622]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TFEMLPHFLL DLQRMPNPWS IVVLCLYEAG KFDKLRLLDI FCEILDPEAR YLKYFSPSEI  60
   61 VNSQSHNSGR NNVIRRVLRK LRDLSPSQLS SMLKSWENLT AEFTEINDKV IELHPFMRAV 120
  121 EAAGQRQGLP NSPKKHASRS NSKLEKELKA MTDKVATVIE FMLREYMKPV ESVPFHEILC 180
  181 FKNVDKLQSA LLGDPRGRIQ LDLLESHDIL HCVC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [623-734]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CSQRGTTLLP SMHDTSILYK LAQEHADVIN LHDWYQSFKT ILIPRSSKAK QKSKSSSKSK  60
   61 KRKEICEEPE APAEALIQAR FCRAVMELQI TGLIRMPSKR RPDFVQRVAF GS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle