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View Structure Prediction Details

Protein: gi|19386798
Organism: Oryza sativa Japonica Group
Length: 646 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|19386798.

Description E-value Query
Range
Subject
Range
gi|222615549, gi... - gi|222615549|gb|EEE51681.1| hypothetical protein OsJ_33035 [Oryza sativa Japonica Group], gi|2156947...
gi|218185284 - gi|218185284|gb|EEC67711.1| hypothetical protein OsI_35189 [Oryza sativa Indica Group]
646.0 [0..2] [643..5]

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Predicted Domain #1
Region A:
Residues: [1-62]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAPPGGQE KVIAAAQHIV KSLANSKNAA DDMIRILSGF DDRLTFMSDL FPPPPPAAAA  60
   61 VR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [63-646]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPSVVEEEEA GPDDAREDEV EEAAELVERW DSPEEGDRLV FDSAKDAGDY LGAAAVLVGA  60
   61 RGARAEAALQ AAMARLEDEF RHLLARGMSP LAGEDLHASL LRRLSLTVPS FASSASDLDC 120
  121 PSFASHTGDG DESGGAGGRA SVSDEEISPY LISPDTVGAL RGIADVMLRA GYGPELCQVY 180
  181 GEMRRDTLME CLAVLGVDKM SLEEVQRVEW GVLDGKMKKW IQALKVVVRG LVAEERRICN 240
  241 QIFAADAEAE EDCFTEAAKG CVLQLLNFGD AIAIGKRSSE KLFRILGMYE ALDEVLPELE 300
  301 GLFSGDARDF IKEEAVGILM RLGDAVRGTV AEFANAIQGE TSRRALPGGE IHPLTRYVMN 360
  361 YVRLLADYSR SLNQLLKDWD TELENGGDNV NMTPLGQCVL ILITHLQAKI EEKSKLYEDE 420
  421 ALQNIFLMNN LLYIVQKVKD SELKTLLGDN WIRQRRGQIR RYSTGYLRSS WTRVLACLRD 480
  481 DGLPQTMGSS SALKASLKER FKNFNLAFEE LYKTQTTWKV VDPQLREELK ISISEKVLPA 540
  541 YRSFVGRFRG QLEGGRNSAR YIKYNPEDLE NQVSDFFEGR RPNA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 118.0
Match: 2pftA
Description: No description for 2pftA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle