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View Structure Prediction Details

Protein: RCL1
Organism: Homo sapiens
Length: 373 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RCL1.

Description E-value Query
Range		 Subject
Range
RCL1_MOUSE - RNA 3'-terminal phosphate cyclase-like protein OS=Mus musculus GN=Rcl1 PE=2 SV=1
 0.0 [1..373] [1..373]
gi|109111645 - gi|109111645|ref|XP_001084388.1| PREDICTED: RNA cyclase homolog [Macaca mulatta]
 0.0 [1..373] [1..373]
RCL1 - RNA terminal phosphate cyclase-like 1
 0.0 [1..373] [1..373]
gi|73946912 - gi|73946912|ref|XP_541299.2| PREDICTED: similar to RNA cyclase homolog [Canis familiaris]
 0.0 [1..373] [105..477]
gi|50761706 - gi|50761706|ref|XP_424808.1| PREDICTED: similar to RNA 3-terminal phosphate cyclase-like protein [Ga...
 0.0 [7..373] [8..374]
RCL1_BOVIN - RNA 3'-terminal phosphate cyclase-like protein OS=Bos taurus GN=RCL1 PE=2 SV=1
 0.0 [1..373] [1..373]
gi|147904523, gi... - gi|28277297|gb|AAH45026.1| MGC53171 protein [Xenopus laevis], gi|147904523|ref|NP_001079592.1| simil...
 0.0 [1..373] [1..372]
gi|114623668 - gi|114623668|ref|XP_520471.2| PREDICTED: RNA cyclase homolog isoform 2 [Pan troglodytes]
 0.0 [1..373] [1..373]

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Predicted Domain #1
Region A:
Residues: [1-373] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATQAHSLSY AGCNFLRQRL VLSTLSGRPV KIRKIRARDD NPGLRDFEAS FIRLLDKITN  60
   61 GSRIEINQTG TTLYYQPGLL YGGSVEHDCS VLRGIGYYLE SLLCLAPFMK HPLKIVLRGV 120
  121 TNDQVDPSVD VLKATALPLL KQFGIDGESF ELKIVRRGMP PGGGGEVVFS CPVRKVLKPI 180
  181 QLTDPGKIKR IRGMAYSVRV SPQMANRIVD SARSILNKFI PDIYIYTDHM KGVNSGKSPG 240
  241 FGLSLVAETT SGTFLSAELA SNPQGQGAAV LPEDLGRNCA RLLLEEIYRG GCVDSTNQSL 300
  301 ALLLMTLGQQ DVSKVLLGPL SPYTIEFLRH LKSFFQIMFK IETKPCGEEL KGGDKVLMTC 360
  361 VGIGFSNLSK TLK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 1qmhA
Description: RNA 3'-terminal phosphate cyclase, RPTC, insert domain; RNA 3'-terminal phosphate cyclase, RPTC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.54689525592227 bayes_pls_golite062009
transferase activity 1.7007536630883 bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups 1.24131488513793 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle