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View Structure Prediction Details

Protein: gi|15241124, gi|...
Organism: Arabidopsis thaliana
Length: 185 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15241124, gi|....

Description E-value Query
Range
Subject
Range
gi|116184449 - gi|116184449|ref|ZP_01474386.1| hypothetical protein VEx2w_02003038 [Vibrio sp. Ex25]
182.0 [0..15] [183..16]

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Predicted Domain #1
Region A:
Residues: [1-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEAKVEAKD GTISVASAFS GHQQAVHDSD HKFLTQAVEE AYKGVDCGDG GPFGAVIVHN  60
   61 NEVVASCHNM VLKYTDPTAH AEVTAIREAC KKLNKIELSE CEIYASCEPC PMCFGAIHLS 120
  121 RLKRLVYGAK AEAAIAIGFD DFIADALRGT GVYQKSSLEI KKADGNGAAI AEQVFQNTKE 180
  181 KFRLY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.154902
Match: 1z3aA
Description: Crystal structure of tRNA adenosine deaminase TadA from Escherichia coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.177505784657 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle