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View Structure Prediction Details

Protein: DI197_ARATH
Organism: Arabidopsis thaliana
Length: 211 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DI197_ARATH.

Description E-value Query
Range
Subject
Range
gi|10177152, gi|... - gi|15239827|ref|NP_199734.1| HRB1 (HYPERSENSITIVE TO RED AND BLUE) [Arabidopsis thaliana], gi|101771...
286.0 [0..1] [211..1]
gi|25992529 - gi|25992529|gb|AAN77145.1| fiber protein Fb2 [Gossypium barbadense]
239.0 [0..1] [209..1]
gi|66271049 - gi|66271049|gb|AAY43802.1| Fb2 [Gossypium hirsutum]
233.0 [0..1] [209..1]
DI191_ORYSJ - Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica GN=DI19-1 PE=2 SV=1
216.0 [0..1] [209..1]

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Predicted Domain #1
Region A:
Residues: [1-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSNSWINCP PVFSSSPSSR RYQSRSDLYL GDVEGEDDLK AEFMCPFCAD EFDIVGLCCH  60
   61 IDVNHPVEAK NGVCPVCTKK VGLDIVGHIT TQHGNVFKVQ RRRRLRKGGY SSTYLTLKKE 120
  121 LREANLQSLG GSSTFIPSSN IDSDPLLSSF MFKPPSAIPI TEGDSVAQVS PKDTSKSKIQ 180
  181 QESFSNEDQE KAKKSKFVRG LLWSTMLEDK F

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 133.0
Match: PF05605.4
Description: No description for PF05605.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle