| Protein: | gi|22137126, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 300 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22137126, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
339.0 | [0..1] | [280..1] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MMVANSFDLW QKDVFFSAAE EVQESADIME SAYRLWFKEK RDGRVSVESD ELCKELQAAL 60
61 STAKWQLEEF ERAVSLSHGN CRDDTTLTRH KQFVTAIENQ IYQVESTLLE SLSENGKQP
|
| Detection Method: |  |
| Confidence: | 27.221849 |
| Match: | 1lvfA |
| Description: | Syntaxin 6, SNAP-25 homolog |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.068037611730119 | bayes_pls_golite062009 |
|
Region A: Residues: [120-208] |
1 11 21 31 41 51
| | | | | |
1 LRWVDLNKEE RDDLAMFLSG SSQTSESLNS DSINLRDSST SSVAENPRGI NGRREGRCYG 60
61 DSPDCVIDID DIGSPESADK KGGTRRTWS
|
| Detection Method: | |
| Confidence: | 11.0 |
| Match: | 2npsD |
| Description: | No description for 2npsD was found. |
|
Region A: Residues: [209-300] |
1 11 21 31 41 51
| | | | | |
1 SPNVPNISAL RINVPVNAKE EEREKFLSHI EDTPKEKGAK PMFWLQRCRD YNQLFDRVKV 60
61 YQRRFRVPLS RPIKLILSLT LILILLLFIL RT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.590 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.587 | a.74.1 | Cyclin-like |
| View | Download | 0.566 | a.74.1 | Cyclin-like |
| View | Download | 0.547 | a.74.1 | Cyclin-like |
| View | Download | 0.540 | a.85.1 | Hemocyanin, N-terminal domain |
