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View Structure Prediction Details

Protein: NILP2_ARATH
Organism: Arabidopsis thaliana
Length: 307 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NILP2_ARATH.

Description E-value Query
Range
Subject
Range
gi|7267521, gi|7... - gi|7321068|emb|CAB82115.1| nitrilase 1 like protein [Arabidopsis thaliana], gi|7267521|emb|CAB78004....
303.0 [0..1] [298..1]

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Predicted Domain #1
Region A:
Residues: [1-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAYSVSLDF TKPSLFTRIT LSSQIPLTMA TTVNKTVRVA AAQMTSVNDL MTNFATCSRL  60
   61 VQEAALAGAK LICFPENFSF VGDKEGESVK IAEPLDGPVM ERYCSLARDS NIWLSLGGFQ 120
  121 ERFDDTHLCN THVVIDDAGM IRDTYQKMHL FDVDVPGGSS YKESSFTVPG TKIVSVDSPV 180
  181 GRLGLTVCYD LRFPKIYQQL RFEQKAQVLL VPSAFTKVTG EAHWEILLRA RAIETQCYVI 240
  241 AAAQAGKHNE KRESYGDTLI IDPWGTVVGR LPDRVSTGIV VADIDFSLID SVRTKMPIDK 300
  301 QRVSIDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.69897
Match: 1emsA
Description: NIT-FHIT fusion protein, C-terminal domain; NIT-FHIT fusion protein, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.64442398754697 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.35962310800332 bayes_pls_golite062009
N-carbamoylputrescine amidase activity 0.749539597459006 bayes_pls_golite062009
hydrolase activity 0.06604196264626 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle