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View Structure Prediction Details

Protein: DTX39_ARATH
Organism: Arabidopsis thaliana
Length: 507 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX39_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
331.0 [0..32] [506..622]

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Predicted Domain #1
Region A:
Residues: [1-263]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVSNETVER TDLRTPLVDP ADTEVKPLPE VGLESVLTES SLSYRRRVYL GACIELKVLF  60
   61 RLALPAILIY LVNSGMGISA RVFAGHVGSQ ELAAASIGNS CFNLVYGLML GMGSAVETLC 120
  121 GQAYGAHRYE MLGIYLQRAT IVLALVGLPM TLLYTFSYPI LILLGEPKTV SYMGSKYIAG 180
  181 LIPQIFAYAV NFTAQKFLQA QSVVAPSAFI SAAALILQIL LTWITVYVMD MGFMGIAYVL 240
  241 TISWWVIVGS QCFYIAVSPK FRH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 39.39794
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [264-507]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TWTGLSWRSL QGLWSFFKLS AGSAVMICLE MWYSQILVLL AGLLENPARS LDSLSICMSI  60
   61 SALSFMVSVG FNAAVSVRTS NELGAGNPKS AWFSTWTATF VSFVISVTEA LAVIWFRDYV 120
  121 SYIFTEDADV AKAVSDLCPF LAITIILNGI QPVLSGVAVG CGWQTYVAYV NVGCYYVVGI 180
  181 PVGCILGFTF DFQAKGIWTG MIGGTLMQTL ILLYVTYRTD WDKEVEKARK RLDLWDDKKE 240
  241 PLQN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 45.327902
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle