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View Structure Prediction Details

Protein: gi|18418333, gi|...
Organism: Arabidopsis thaliana
Length: 581 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18418333, gi|....

Description E-value Query
Range
Subject
Range
gi|77973067, gi|... - gi|77973067|ref|ZP_00828620.1| COG0033: Phosphoglucomutase [Yersinia frederiksenii ATCC 33641], gi|2...
420.0 [0..15] [568..2]

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Predicted Domain #1
Region A:
Residues: [1-581]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTLLPCPRE KMAFNLNSSM RAHTLSKYQF VLSKQRTFYC NATSSSATVP SLDKNDFLKL  60
   61 QNGSDIRGVA VTGVEGEPVS LPEPVTEAIA AAFGQWLLHK KKAESRRLRV SVGHDSRISA 120
  121 QTLLEAVSRG LGVSGLDVVQ FGLASTPAMF NSTLTEDESF LCPADGAIMI TASHLPYNRN 180
  181 GFKFFTSDGG LGKVDIKNIL ERAADIYKKL SDENLRKSQR ESSSITKVDY MSVYTSGLVK 240
  241 AVRKAAGDLE KPLEGFHIVV DAGNGAGGFF AAKVLEPLGA ITSGSQFLEP DGMFPNHIPN 300
  301 PEDKAAMEAI TKAVLDNKAD LGIIFDTDVD RSAAVDSSGR EFNRNRLIAL LSAIVLEEHP 360
  361 GTTIVTDSVT SDGLTSFIEK KLGGKHHRFK RGYKNVIDEA IRLNSVGEES HLAIETSGHG 420
  421 ALKENHWLDD GAYLMVKILN KLAAARAAGQ GSGSKVLTDL VEGLEEPKVA LELRLKIDKN 480
  481 HPDLEGSDFR EYGEKVLQHV SNSIETNPNL IIAPVNYEGI RVSGFGGWFL LRLSLHDPVL 540
  541 PLNIEAQSED DAVKLGLVVA TTVKEFNALD TCALSNLTHS S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 110.0
Match: 1k35A
Description: Phosphomannomutase/phosphoglucomutase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoacetylglucosamine mutase activity 3.53149114857071 bayes_pls_golite062009
intramolecular transferase activity, phosphotransferases 1.39265790127077 bayes_pls_golite062009
catalytic activity 1.16308025600757 bayes_pls_golite062009
phosphomannomutase activity 1.12206356769537 bayes_pls_golite062009
isomerase activity 0.85386577585861 bayes_pls_golite062009
intramolecular transferase activity 0.47223148541913 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle