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View Structure Prediction Details

Protein: gi|20260262, gi|...
Organism: Arabidopsis thaliana
Length: 446 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20260262, gi|....

Description E-value Query
Range
Subject
Range
gi|15229058, gi|... - gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana], gi|6522571|...
342.0 [0..2] [441..3]

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Predicted Domain #1
Region A:
Residues: [1-446]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVVTILILA LTSVIPIYAN VHGAGKICDE LGRRSLSTRP HSVSITDFGA VGDGKTLNTL  60
   61 AFQNAVFYLM SFADKGGAQL YVPPGHWLTG SFSLTSHLTL FLENGAVIVA SQDPSHWEVV 120
  121 DPLPSYGRGI DLPGKRYKSL INGNKLHDVV VTGDNGTIDG QGLVWWDRFT SHSLKYNRPH 180
  181 LIEFLSSENV IVSNLTFLNA PAYSIYSIYS SHVYIHKILA HSSPKSPYTI GIVPDSSDYV 240
  241 CIQNSTINVG YDAISLKSGW DEYGIAYSRP TENVHIRNVY LRGASGSSIS FGSEMSGGIS 300
  301 DVVVDNAHIH YSLTGIAFRT TKGRGGYIKE IDISNIDMLR IGTAIVANGS FGSHPDDKYD 360
  361 VNALPLVSHI RLSNISGENI GIAGKLFGIK ESPFSSVTLS NVSLSMSSGS SVSWQCSYVY 420
  421 GSSESVIPEP CPELKRDADA YGRAAV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.69897
Match: 2uveA
Description: No description for 2uveA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle