| Protein: | BASS3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 431 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BASS3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
227.0 | [0..1] | [431..1] |
|
|
191.0 | [0..101] | [415..235] |
|
|
187.0 | [0..101] | [431..1] |
|
|
180.0 | [0..94] | [422..9] |
|
|
179.0 | [0..80] | [429..4] |
|
|
178.0 | [0..101] | [429..1] |
|
|
177.0 | [0..98] | [429..3] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MTLIASLSLP PPAIQRQSLS EFHNLPAKSQ SFNCQFRSSS SPLSSLHSSS LSNFLDFRLR 60
61 RRNSGLVPVV ACSTTPFMGR VGLHWRDGNM SLLSFCGG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.705 | d.131.1 | DNA clamp |
| View | Download | 0.681 | b.1.1 | Immunoglobulin |
| View | Download | 0.681 | b.1.1 | Immunoglobulin |
| View | Download | 0.656 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.656 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.653 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.620 | d.263.1 | Description not found. |
| View | Download | 0.620 | d.74.5 | Hypothetical protein Yml108w |
|
Region A: Residues: [99-333] |
1 11 21 31 41 51
| | | | | |
1 TDVTEKADSS QFWSALLPFV VALTAVAALS YPPSFTWVSK DLYAPALGGI MLSIGIQLSV 60
61 DDFALAFKRP VPLSVGFVAQ YVLKPLLGVL VANAFGMPRT FYAGFILTCC VAGAQLSSYA 120
121 SSLSKADVAM SILLTSSTTI ASVIFTPLLS GLLIGSVVPV DAVAMSKSIL QVVLVPITLG 180
181 LVLNTYAKPV VTLLQPVMPF VAMVCTSLCI GSPLSINRSQ ILSAEGLGLI VPIVT
|
| Detection Method: | |
| Confidence: | 33.886057 |
| Match: | PF01758.7 |
| Description: | No description for PF01758.7 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [334-431] |
1 11 21 31 41 51
| | | | | |
1 FHAVAFALGY WFSKIPGLRQ EEEVSRTISL CTGMQSSTLA GLLASQFLGS SQAVPAACSV 60
61 VVMAIMGLCL ASFWGNGFRI RDVLSLSTPQ STGYTAES
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
