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View Structure Prediction Details

Protein: GID1C_ARATH
Organism: Arabidopsis thaliana
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GID1C_ARATH.

Description E-value Query
Range
Subject
Range
GID1_ORYSJ - Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1
GID1_ORYSA - Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLI...
212.0 [0..1] [343..1]

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Predicted Domain #1
Region A:
Residues: [1-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGSEEVNLI ESKTVVPLNT WVLISNFKLA YNLLRRPDGT FNRHLAEFLD RKVPANANPV  60
   61 NGVFSFDVII DRQTNLLSRV YRPADAGTSP SITDLQNPVD GEIVPVIVFF HGGSFAHSSA 120
  121 NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK 180
  181 VRIFLAGDSS GGNIVHNVAV RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR 240
  241 DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL 300
  301 KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.30103
Match: 1evqA
Description: Carboxylesterase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle