| Protein: | gi|17473588, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 397 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17473588, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
323.0 | [0..19] | [397..210] |
|
|
304.0 | [0..15] | [385..51] |
|
|
273.0 | [0..22] | [386..87] |
|
|
264.0 | [0..1] | [396..48] |
|
|
264.0 | [0..1] | [396..48] |
|
Region A: Residues: [1-113] |
1 11 21 31 41 51
| | | | | |
1 MQDLCIMAHH CCSRFLDLSQ FKGLKGNQVT SCADILSAML LRAIGQKLQM AYGLNARLLG 60
61 FLKSSRDKVI LPCGDIAALV YLWNPFTIVS CVGLSTSPIE NLAVILALFG AVT
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.792 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.792 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.778 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.762 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.762 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.691 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.658 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.658 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.644 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.644 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
|
Region A: Residues: [114-234] |
1 11 21 31 41 51
| | | | | |
1 RRVPLAAFGL VIATHLSLYP ATLTIPIIFL LGYGLDAPPI KLFLQTRSVE NEESSTSTVS 60
61 KQAKLKQTTH LPFLWKTVAH FLFWVLLWSL YVLILCALSL NKYGGLEEMF KRTYGFILSI 120
121 E
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [235-397] |
1 11 21 31 41 51
| | | | | |
1 DLSPNIGVFW YFFAEVFDFF RNFFLIVLHV NILFMLLPLA IRLKHRPCFL AFIYLAISSI 60
61 LKSYPSVGDS ALYLSLWALF VNELLDMKFS FFLFCGYLGI SLLSPVMHNL WIWRGTGNAN 120
121 FYFGNAIGYA CFQIVFVVES VSAMLNHDRA LKRSNSNHRE VKS
|
| Detection Method: | |
| Confidence: | 97.60206 |
| Match: | PF06728.4 |
| Description: | No description for PF06728.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
