YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: plexA-PE
Organism: Drosophila melanogaster
Length: 419 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for plexA-PE.

Description E-value Query
Range
Subject
Range
plexA-PA - The gene plexin A is referred to in FlyBase by the symbol Dmel\plexA (CG11081, FBgn0025741). It is a...
376.0 [0..1] [408..1]

Back

Predicted Domain #1
Region A:
Residues: [1-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFVLSVLLI AILKDKYDYW LPSRTGCQTL AANIWSDKTT AQNEPINLTN ANAPIKNAKN  60
   61 LNSTITNVAA FDTKLNHLLV DTITGRVFVG GVNRLYQLSP DLELSETVKT GPQNDSVECS 120
  121 ILDCPLNAVR SPTDNYNKVL LIDRATSRLI ACGSLFQGTC TVRNLQNVSI IEHEVPDAVV 180
  181 ANDANSSTVA FIAPGPPQHP VTNVMYVGVT YTNNSPYRSE IPAVASRSLE KTKMFQIASS 240
  241 AVTTGTRTFI NSYARETYFV NYVYGFSSER FSYFLTTQLK HSHHSSPKEY ITKLVRICQE 300
  301 DSNYYSYTEI PVECISDAQG GTKFNLVQAG FLGKPSSDLA QSLGISIQDD VLFAVFSKGE 360
  361 GNTPTNNSAL CIYSLKSIRR KFMQNIKSCF NGSGMRGLDF ISPSMPCVLT SGEQALLGE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.0
Match: 2uzxB
Description: No description for 2uzxB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle