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View Structure Prediction Details

Protein: gi|36787579, gi|...
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 145 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|36787579, gi|....

Description E-value Query
Range
Subject
Range
gi|75854157, gi|... - gi|75854157|ref|ZP_00761869.1| COG3766: Predicted membrane protein [Vibrio sp. Ex25], gi|116184089|r...
154.0 [0..10] [145..3]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITLENEEQA FTQFMHGVGN FGLCFGLALV FFIVFKFIYT IITPHDEWKL IKQEKNSAAA  60
   61 ISLGGALVGY SIAIASAASN SVGV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 14.823909
Match: PF03994.5
Description: No description for PF03994.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IDFVMWSVVA LLAQIAGFFM VRIFMMPKIV SRIENNEVPA AIVLASVSIS VGLLNAACMT  60
   61 Y

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 12.481486
Match: PF03994.5
Description: No description for PF03994.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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