YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|37527806, gi\|...
Organism:	Photorhabdus luminescens subsp. laumondii TTO1
Length:	202 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37527806, gi|....

Description	E-value	Query Range	Subject Range
gi\|16761957 - gi\|16761957\|ref\|NP_457574.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Typhi str. C... gi\|62129329, gi\|... - gi\|62181696\|ref\|YP_218113.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Choleraesuis... gi\|25371476, gi\|... - gi\|25371476\|pir\|\|AF0889 conserved hypothetical protein STY3360 [imported] - Salmonella enterica subs... gi\|56415123, gi\|... - gi\|56415123\|ref\|YP_152198.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Paratyphi A ... gi\|29139078, gi\|... - gi\|29143444\|ref\|NP_806786.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Typhi str. T... gi\|194458111, gi... - gi\|194471747\|ref\|ZP_03077731.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Kentucky ... gi\|194406182, gi... - gi\|194447878\|ref\|YP_002047179.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Heidelbe... gi\|194404889, gi... - gi\|194446226\|ref\|YP_002042449.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Newport ... gi\|205343553, gi... - gi\|205343553\|gb\|EDZ30317.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Weltevreden s... gi\|198243301, gi... - gi\|198243301\|ref\|YP_002217162.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Dublin s... gi\|197364052, gi... - gi\|197364052\|ref\|YP_002143689.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Paratyph... gi\|197263779, gi... - gi\|197263779\|ref\|ZP_03163853.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Saintpaul... gi\|194736103, gi... - gi\|194736103\|ref\|YP_002116137.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Schwarze... gi\|205333807, gi... - gi\|205333807\|gb\|EDZ20571.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Kentucky str.... gi\|205331190, gi... - gi\|205331190\|gb\|EDZ17954.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- ... gi\|205323267, gi... - gi\|205323267\|gb\|EDZ11106.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Saintpaul str... gi\|161616171, gi... - gi\|161616171\|ref\|YP_001590136.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Paratyph... gi\|238909983 - gi\|238909983\|ref\|ZP_04653820.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Tennessee... gi\|168463610, gi... - gi\|195633556\|gb\|EDX51970.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Newport str. ... gi\|205348595, gi... - gi\|205348595\|gb\|EDZ35226.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Hadar str. RI... gi\|168243008, gi... - gi\|205337736\|gb\|EDZ24500.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Heidelberg st... gi\|197289028, gi... - gi\|197289028\|gb\|EDY28399.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Schwarzengrun... gi\|224584983, gi... - gi\|224584983\|ref\|YP_002638782.1\| hypothetical protein SPC_3256 [Salmonella enterica subsp. enterica ... gi\|214001843 - gi\|214001843\|ref\|ZP_03412578.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Typhi str... lcl\|NC_016856.1_... - [gene=yqiA] [protein=esterase YqiA] [protein_id=YP_005239354.1] [location=complement(3364134..336471... gi\|206710244, gi... - gi\|207858441\|ref\|YP_002245092.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Enteriti... gi\|205273879, gi... - gi\|205354098\|ref\|YP_002227899.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Gallinar... gi\|204928245, gi... - gi\|204928245\|ref\|ZP_03219445.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Javiana s... gi\|199604693, gi... - gi\|200387595\|ref\|ZP_03214207.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Virchow s... gi\|213645891 - gi\|213645891\|ref\|ZP_03375944.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Typhi str... gi\|213579855 - gi\|213579855\|ref\|ZP_03361681.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Typhi str... gi\|213424344 - gi\|213424344\|ref\|ZP_03357168.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Typhi str... gi\|213052525 - gi\|213052525\|ref\|ZP_03345403.1\| esterase YqiA [Salmonella enterica subsp. enterica serovar Typhi str...	145.0	[0..1]	[193..1]

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Predicted Domain #1

Region A:
Residues: [1-202]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTLLYLHGF NSSPQSAKAN ALKAWLYQHH PDIDMLVPQL PPYPEEAAEL LENLVMEHAG  60
   61 DDLGIVGSSL GGYLAIWLSQ CFSLPAVVVN PAVRPFELLR DYLGENINPY TNQRYTLESR 120
  121 HIHDLKSMWI EPLESPDLIW LLQQTGDEVL DYRQAVAYLV LCKQTIESGG NHAFIGFEHY 180
  181 FPQIINFLGL SSDGEKKLAK NV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	22.69897
Match:	1va4A
Description:	Pseudomonas fluorescens aryl esterase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.39629727416851	bayes_pls_golite062009
hydrolase activity	0.63165630246021	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	0.0166640502592221	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: