YRC Public Data Repository - Protein Structure Prediction

Protein:	MINC_PHOLL
Organism:	Photorhabdus luminescens subsp. laumondii TTO1
Length:	227 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MINC_PHOLL.

Description	E-value	Query Range	Subject Range
MINC_YERPY - Probable septum site-determining protein MinC OS=Yersinia pseudotuberculosis serotype O:3 (strain YP... gi\|167424792, gi... - gi\|167424792\|ref\|ZP_02316545.1\| septum site-determining protein MinC [Yersinia pestis biovar Mediaev... MINC_YERPB - Probable septum site-determining protein MinC OS=Yersinia pseudotuberculosis serotype IB (strain PB1... MINC_YERPG - Probable septum site-determining protein MinC OS=Yersinia pestis bv. Antiqua (strain Angola) GN=minC... MINC_YERP3 - Probable septum site-determining protein MinC OS=Yersinia pseudotuberculosis serotype O:1b (strain I... gi\|149365993, gi... - gi\|149365993\|ref\|ZP_01888028.1\| cell division inhibitor [Yersinia pestis CA88-4125], gi\|149292406\|gb... MINC_YERPS - Probable septum site-determining protein MinC OS=Yersinia pseudotuberculosis GN=minC PE=3 SV=1 MINC_YERPP - Probable septum site-determining protein MinC OS=Yersinia pestis (strain Pestoides F) GN=minC PE=3 S... gi\|229702267, gi... - gi\|229894794\|ref\|ZP_04509974.1\| cell division inhibitor [Yersinia pestis Pestoides A], gi\|229702267\|... gi\|229897499, gi... - gi\|229897499\|ref\|ZP_04512655.1\| cell division inhibitor [Yersinia pestis biovar Orientalis str. PEXU... gi\|165919637, gi... - gi\|165928354\|ref\|ZP_02224186.1\| septum site-determining protein MinC [Yersinia pestis biovar Orienta... gi\|229898143, gi... - gi\|229898143\|ref\|ZP_04513292.1\| cell division inhibitor [Yersinia pestis biovar Orientalis str. Indi... gi\|166210547, gi... - gi\|166210547\|ref\|ZP_02236582.1\| septum site-determining protein MinC [Yersinia pestis biovar Antiqua... gi\|165991851, gi... - gi\|166009296\|ref\|ZP_02230194.1\| septum site-determining protein MinC [Yersinia pestis biovar Antiqua... gi\|167420262, gi... - gi\|167420262\|ref\|ZP_02312015.1\| septum site-determining protein MinC [Yersinia pestis biovar Orienta... gi\|167401387, gi... - gi\|167401387\|ref\|ZP_02306884.1\| septum site-determining protein MinC [Yersinia pestis biovar Antiqua... MINC_YERPE - Septum site-determining protein MinC OS=Yersinia pestis GN=minC PE=3 SV=1 gi\|45441723, gi\|... - gi\|45441723\|ref\|NP_993262.1\| septum formation inhibitor [Yersinia pestis biovar Microtus str. 91001]... gi\|21959077, gi\|... - gi\|22126118\|ref\|NP_669541.1\| septum formation inhibitor [Yersinia pestis KIM], gi\|21959077\|gb\|AAM857... gi\|218929185, gi... - gi\|218929185\|ref\|YP_002347060.1\| septum formation inhibitor [Yersinia pestis CO92], gi\|16122317\|ref\|... MINC_YERPS - Probable septum site-determining protein MinC OS=Yersinia pseudotuberculosis serotype I (strain IP32... MINC_YERPA - Probable septum site-determining protein MinC OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=min... MINC_YERPN - Probable septum site-determining protein MinC OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=mi...	287.0	[0..1]	[226..1]

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Predicted Domain #1

Region A:
Residues: [1-227]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQSPIELKG SNFTLSVVHL HNDQPEIILQ ALQEKVEQAP DFLKNAPVVI NISALPADAD  60
   61 LKALHHAIDS AGFRIVGMSG CRDEQQRRAV IKASLPLLSE GKKQKTSAKE DKPAEPAIKK 120
  121 TRVINLPVRS GQRIYAQGSD LIVTSNVSAG AELIADGNIH IYGMMRGRAL AGASGDQECL 180
  181 VFCTHLNAEL ISIAGQYWLG DKIPTELAGK AAKLSLVNNE LTIEPLI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.0
Match:	1hf2A
Description:	Cell-division inhibitor MinC, C-terminal domain; Cell-division inhibitor MinC, N-terminal domain
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits