YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Y3840_PHOLL
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 109 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y3840_PHOLL.

Description E-value Query
Range
Subject
Range
gi|113527138, gi... - gi|113868362|ref|YP_726851.1| recombinational DNA repair protein (RecF pathway) [Ralstonia eutropha ...
157.0 [0..4] [107..3]

Back

Predicted Domain #1
Region A:
Residues: [1-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGKGGLGNL MKQAQQMQDK MQKMQEEIAS LEVTGESGAG LVKVTINGAH NCRRVEIDPS  60
   61 LMEDDKEMLE DLIAAAFNDA ARRIEETQKE KMAGISSGMQ LPPGFKMPF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.09691
Match: 1pugA
Description: Hypothetical upf0133 protein YbaB
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle