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View Structure Prediction Details

Protein: YACG_PHOLL
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 65 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YACG_PHOLL.

Description E-value Query
Range
Subject
Range
gi|24158901 - gi|24158901|pdb|1LV3|A Chain A, Solution Nmr Structure Of Zinc Finger Protein Yacg From Escherichia ...
107.0 [0..1] [65..4]

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Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELLTIECP TCGKTVVWGE ISPYRPFCSK RCQLIDLGQW ANEEKRIPSQ SENSDSDDWS  60
   61 GQPEQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.30103
Match: 1lv3A
Description: Hypothetical zinc finger protein YacG
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.684232803797358 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle