YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|37527058, gi|...
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 233 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37527058, gi|....

Description E-value Query
Range
Subject
Range
gi|238791911, gi... - gi|77976968|ref|ZP_00832431.1| COG0586: Uncharacterized membrane-associated protein [Yersinia interm...
171.0 [0..12] [229..1]

Back

Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNIMEFLTH FVDFAKFIID FILHIDIHLA ELVAQYGDWV YGILFLILFC ETGLVITPFL  60
   61 PGDSLLFVAG ALAALGSNDL NVHIMVALMI IAAIIGDAVN YAIGRIFGER LFTNPNSKIF 120
  121 RRSYLDKTHE FYEKHGGKAI ILARFVPIIR TFAPFVAGMG KMSYRRFAAY NVIGALVWVL 180
  181 LFTYSGYIFG DMPMVQQNLK LLIVAIIFIS ILPGVIEIWR HRRTVMKQKS DNR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 4.552842
Match: PF09335.2
Description: No description for PF09335.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle