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View Structure Prediction Details

Protein: gi|37527054, gi|...
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 168 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37527054, gi|....

Description E-value Query
Range
Subject
Range
gi|227327253 - gi|227327253|ref|ZP_03831277.1| colicin V production protein [Pectobacterium carotovorum subsp. caro...
gi|49612502, gi|... - gi|50121976|ref|YP_051143.1| colicin V production protein [Pectobacterium atrosepticum SCRI1043], gi...
150.0 [0..1] [163..1]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVWIDYAIIA IIGFSALVSL IRGFIREALS LVTWGCAFFV ASHFYTYLAV YFTRFEDELV  60
   61 RNGIAIALLF IATLIVGSMV NYVIGSLVQR TGLSGTDRVL GVCFGALRGV LIVAAILFFL 120
  121 DTFTPLARSE DWKQSQLIPQ FSHIIRWFFD YLQNASSFLP EKYTSPFG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 62.309804
Match: PF02674.7
Description: No description for PF02674.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle