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View Structure Prediction Details

Protein: gi|37525837, gi|...
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37525837, gi|....

Description E-value Query
Range
Subject
Range
gi|77975730, gi|... - gi|77975730|ref|ZP_00831264.1| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia f...
233.0 [0..8] [219..15]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAINIIGLF AFFFITSMAW GNNLPQAMEH YFQQIHRDNH YKVSVNIRTP EQQWPQCERP  60
   61 EIQPAIGGQN WGNLSLPVIC H

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQRKFIQVAV SVTGNYLVTR RAISRNDVLS DKDFQVRRGL LERLPHDLVI NKNEIKNSIA  60
   61 IRNIPAGQAI THNMLRRPWV VRSGQSVAVI IQGNGFQIRN EGKAINNAAI SDKVRVRINS 120
  121 GHVITGQALE NGNVKIML

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.73
Match: 1wvoA
Description: Solution structure of RSGI RUH-029, an antifreeze protein like domain in human N-acetylneuraminic acid phosphate synthase gene.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle